| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1963 |
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| Symbol | |
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| ID | 8419808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2246979 |
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| End bp | 2248202 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645038551 |
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| Product | quinone-interacting membrane-bound oxidoreductase complex subunit C |
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| Protein accession | YP_003198825 |
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| Protein GI | 258406083 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1150] Heterodisulfide reductase, subunit C |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00829701 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGAAC CCGTGAAAAT TCAGCCGGAT CTGGATTTTA TCAAGGAGCT GCAGGAGGTC
GGGGGCGACA CCCTGAAGAA GTGCTACCAA TGCGCGACCT GTAGCGTTGT CTGTCCCTTG
TCGCCCATTG ACAAGCCCTA TCCCCGCAAG GAGATGGTCT GGGCCCAATG GGGACTGCGT
GACAAACTTC TTAACGATAT CGATATTTGG TTGTGCCACA ATTGCGGACA GTGCTCTGAT
CTCTGCCCGC GGGGCGCCAA GCCCGGTGAC CTGCTGGCCG GATTGCGCAA TATGGCCTAC
CGCAAACTCG TCGAGCCAAC GATTCTGGGC AAGTGGATGA GTTCGGCCAA GTATCTGCCG
CAACTGATCG GGATTCCGGC GATCATTTAT CTGATCATCT GGATCATCCG CGCCGGGATG
CTCGGCACCG CATTCCCGCT CAACGAACAG GGCAACGTCG AATACGGCGT CCTTTTCCCT
GGTGATTACA CCATCGACAC CGTTTTCGGG TTGGTGGCCC TGTTTGTGAT CTACACCTTC
TACAAAGGGA TACGAAAACT GATCGCGTCA TTCCAGGATC AGCCCAAAAC CTTTGTCATT
GGCTATGAGC CCAAGGGCAT CTGGGCCTCG CTGTGGGATA CGGTCAAAGA TGAAATCGTC
ACCCATCGCA AATGGAAAGA TTGCGGAGAG GATTCCGAGG CCGACGAGCA GAAGTTCAAG
GGCCACTTGT TGACCTTCTA CGCGTTCGTG GCCTTGTTCA TTGTCACCAG TGTCGTGGCT
GTGACCCATT GGGGCGGCAA GATCATTCCT TTCCTGGCTC CCATTGGACA CACCCCGATG
CCGTTGTGGC ACCCAGTCAA GATTCTGGCC AATGTCGGCG CTATTGCCCT CCTTGTCGGC
CTGACCTACT TGACCAAACG CCGCTTGAAC CAGGACCCGA ACAAACACGC CTCGACTTTT
TATGACTGGT ATCTGCTTGG CGTGATCTGG GCCGTGGCAG TGACTGGGGT TTTGTGTGAA
CTGCTCCGTC TGGCCGGCGT GGCTGGTCTG GCGTACCCCA TGTACTACCT GCACCTGATC
TCGGTGTTCA TGCTTATCGC GTACCTGCCG TGGTCAAAAT TGGGGCACAT GGTCTATCGG
ACCGCCGCCC TGGCCTATGC CCGGCATATT GGCCGACTGC CCATGGCTTC TGAGAGCCAA
AAGAAAAAAA TATTTGTCAT CTAA
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| Protein sequence | MSEPVKIQPD LDFIKELQEV GGDTLKKCYQ CATCSVVCPL SPIDKPYPRK EMVWAQWGLR
DKLLNDIDIW LCHNCGQCSD LCPRGAKPGD LLAGLRNMAY RKLVEPTILG KWMSSAKYLP
QLIGIPAIIY LIIWIIRAGM LGTAFPLNEQ GNVEYGVLFP GDYTIDTVFG LVALFVIYTF
YKGIRKLIAS FQDQPKTFVI GYEPKGIWAS LWDTVKDEIV THRKWKDCGE DSEADEQKFK
GHLLTFYAFV ALFIVTSVVA VTHWGGKIIP FLAPIGHTPM PLWHPVKILA NVGAIALLVG
LTYLTKRRLN QDPNKHASTF YDWYLLGVIW AVAVTGVLCE LLRLAGVAGL AYPMYYLHLI
SVFMLIAYLP WSKLGHMVYR TAALAYARHI GRLPMASESQ KKKIFVI
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