| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1948 |
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| Symbol | |
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| ID | 8419793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2231180 |
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| End bp | 2232250 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038536 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_003198810 |
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| Protein GI | 258406068 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACAA GTATTATCGC CATCGCCCTG GTTTTGGGGC TGCTTATCTT TTTCCACGAG
CTCGGGCACT TCACCGCCGC CCGCCTGTTG GGCGTCGGTG TGCGGACATT CTCCCTCGGA
TTCGGACCCC GCTTAACCGG ATTCAGGCTC GGGCGCACCG ATTACCGGAT CGCAAGCGTC
CCTTTGGGAG GCTACGTCCA ATTAGTCGGG GAATCCCCGG ACGCTGAACT CCCCGAGGGA
TTCACCTCCC AGGACAGCTT TGCCCGCCGC CCTCCCTGGC AACGCATGCT TGTCGTCGCC
GCCGGCCCGA TTTTCAATTT TATCCTGGCC GTGCTCATCT ACTGGATCAT CTTCGCCTCG
TACGGCCAGC AGGCCATGTT GCCGGTCATC GGCGAGGTCC GGGACCAGAG CCCGGCTTAC
GAGGCCGGGC TGCGGGCCGG CGATCACATC CTCGCTATCA ACGGTCAGCC GGTCGAGTAT
TGGAGCGACG TCGCCCAGCG GATCCAGGCC CACGGTACGG CCCCGCTAGA GCTGCAAATC
CTGCGCGAGG AAACCCAGCG CACCCTGCGC ATGACACCGA CCTTGCAGAC CCGGGAAAAC
ATTTTCGGAG AAAAGACCGA AGTTCCCATC GTGGGGATCA TCGCCGCCGG CAAGACGACA
CGGATCGATA TGGGGCCGCT GGAATCGTTC ACCGCCGCCA ATCAGCAGAC GTGGCAACTG
GTCAAATTGA CCGGCGAGGG TTTAGTCAAG CTTGTCGAGC GGGTCATTCC CCTGGAGACC
GTCGGCGGCC CGATCCTCAT CGCGCAAATG GTCCACCAGC AGGCTGAACA AGGGCTCGTC
CAACTGCTGG CCTTGACCGC ACTGATCAGC ATCAACCTCG GTCTGCTGAA TCTCTTGCCG
ATCCCGGTGC TCGATGGAGG CCATCTCCTG TTTTACTTAG TGGAGACGGT TCTCGGTCGC
CCCCTGGATC CGAAATGGCA GCATGTGGTC AACAAGATCG GTCTTTCCCT CCTTCTGGCC
CTGATGGGCT TGGCTATCTA CAATGACTTG CAGCGTCTGT TCACCAGCTG A
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| Protein sequence | MLTSIIAIAL VLGLLIFFHE LGHFTAARLL GVGVRTFSLG FGPRLTGFRL GRTDYRIASV
PLGGYVQLVG ESPDAELPEG FTSQDSFARR PPWQRMLVVA AGPIFNFILA VLIYWIIFAS
YGQQAMLPVI GEVRDQSPAY EAGLRAGDHI LAINGQPVEY WSDVAQRIQA HGTAPLELQI
LREETQRTLR MTPTLQTREN IFGEKTEVPI VGIIAAGKTT RIDMGPLESF TAANQQTWQL
VKLTGEGLVK LVERVIPLET VGGPILIAQM VHQQAEQGLV QLLALTALIS INLGLLNLLP
IPVLDGGHLL FYLVETVLGR PLDPKWQHVV NKIGLSLLLA LMGLAIYNDL QRLFTS
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