| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1940 |
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| Symbol | |
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| ID | 8419785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2224319 |
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| End bp | 2225068 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645038528 |
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| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
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| Protein accession | YP_003198802 |
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| Protein GI | 258406060 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTG TCCGCGCCCG CCATGCGGGG CACGAATTCG AGGCCCGTCT GGAGGGGACC
CTCCTGGTGC CCACCGACGG CAGCCCCAAA CTGCCACTGC ACCGCGCCGA ACTTCTGGCT
CCGGTGCAAC AGGGCAAAAT CGTCTGCATC GGACTGAACT ATTTTGAGCA TGCCAGGGAA
CTCGGCATGA CCGTGCCCGA GGAACCGCAG ATCTTTTTCA AGCCCTCTTC GGCGGTCATC
GGTCCGGGAG AATCCATAAT CCTGCCCAAG GCGTCGTCGC GGGTGGATTT TGAAGGTGAA
CTCGCTGTGG TCATCGGGCG GGCCTGCCGC CGCCTGCGGC CGGAAGAGGT CCCCGAGCAT
GTCCTGGGGC TGTGCTGCGC CAATGACGTC ACAGCCAGGG ACTTGCAACG CCGGGACGGC
CTTTACGCCC GGGCCAAAGG ATTCGACACC TTTGCCCCCC TGGGACCGTG GATCGAAACC
GCATACCCCG CGCCAGACGA CGTGGCCCTG CAGACCCGGG TCAACGGCAA CGTCCGCCAG
AAGAGCCGGA CCCGGGACAT GATCTGGTCA CCCTGGCAGC TGGTGGCCTT CATTTCTGAA
TGCATGACCC TGCTGCCCGG CGATGTGATC CTGACCGGCA CACCGCCCGG CATCGGACCG
CTGGCTCCCG GCGACCGCGT TGAGGTCAGC ATTGACGGTG TGGGCACCTT GAGCAACACC
GTCGCCGCCG AAACCGCTCT GAAGCAGTAA
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| Protein sequence | MRLVRARHAG HEFEARLEGT LLVPTDGSPK LPLHRAELLA PVQQGKIVCI GLNYFEHARE
LGMTVPEEPQ IFFKPSSAVI GPGESIILPK ASSRVDFEGE LAVVIGRACR RLRPEEVPEH
VLGLCCANDV TARDLQRRDG LYARAKGFDT FAPLGPWIET AYPAPDDVAL QTRVNGNVRQ
KSRTRDMIWS PWQLVAFISE CMTLLPGDVI LTGTPPGIGP LAPGDRVEVS IDGVGTLSNT
VAAETALKQ
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