| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1919 |
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| Symbol | |
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| ID | 8419762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2200886 |
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| End bp | 2201485 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038505 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003198781 |
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| Protein GI | 258406039 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCGA TTGTGCGCTG TATCCTTGCG GTGTGTTGTG CCGCCCTGCT GGGGGGGCCT
CCCCTTCCGG CCCACAGCGG GTCCATATAT TACTATCGCG ATGAACAGGG CGTGACCCAT
TTCACCGATC TCCCCTCCTC GAACAAGTTC AAGCTCTATT CCCTGTTCGC CTCCAAAACG
GGCGCCGACC GGACCGAAAT TCTGGGGCTG GTCCGGAAAT TCAGCCGCTT GCACGACGTG
GACCACCATC TCATTCAGGC TGTGCTGGAA ACGGAATCCG ATTATCGGCC TCAAGCCGTG
TCCACGGCCG GAGCACAGGG ATTGATGCAG ATCATGCCCG AGACGCAGCA GGATCTGGGG
CTCATGGATC CTTTCGAACC TGCGGCCAAT ATTGAAGCTG GGGTACGGTA TTTCAAGGGG
TTGTTGGGCC AGTTCAGCGA ACTCCCCCTG GCCCTGGCCG CATATAATGC CGGCCCGCAA
CGGGTGCGCC GTTATGATGG TATCCCCCCG TACAAGGAAA CCCAACGGTA TGTGCGTAAA
GTGATGTCCC GCTACCAGGA ACTCAAAGCC GGAAACGACC ATGTTCAATC TCGCGAATAA
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| Protein sequence | MRSIVRCILA VCCAALLGGP PLPAHSGSIY YYRDEQGVTH FTDLPSSNKF KLYSLFASKT
GADRTEILGL VRKFSRLHDV DHHLIQAVLE TESDYRPQAV STAGAQGLMQ IMPETQQDLG
LMDPFEPAAN IEAGVRYFKG LLGQFSELPL ALAAYNAGPQ RVRRYDGIPP YKETQRYVRK
VMSRYQELKA GNDHVQSRE
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