| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1907 |
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| Symbol | |
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| ID | 8419750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2191267 |
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| End bp | 2192199 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038493 |
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| Product | Thioredoxin-disulfide reductase |
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| Protein accession | YP_003198769 |
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| Protein GI | 258406027 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000488747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.327863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATAT ATGATGCCAC TGTGATCGGT GGTGGCCCGG CCGGCATGAC GGCACTGTTG
TACCTCATGC GGGCCGGGCT GCAATGCGCC TGGGTGGAAG CCATGGCTCC CGGCGGCCAG
GTGTTGCGCA CCGAGCAAAT CGACAACTAT CCTGGTTTTC CGGAGGGAAT CAAAGGCTAC
GAATTGGCCG ATCTCTTCGC CAAGCATTTG GAACGGTTCT CCTATGACAG CTACACTGAG
GAGGTGACCG GACTGGAGAC GAACGGAGAC GGCGTGCACA CGATCCGTTT TCGAGACGAC
ACCATCCAGT CCAAAACGCT TATCCTCTGT TCCGGAGCTG AATATAAGCG TCTGGGCCTG
CCCCGCGAAG AGGAAATGAC CGGCCGGGGT GTCTCCTATT GCGCACTGTG CGACGGGCAG
TTCTTCAAAG ACCAGACCGT GGCCTGTATC GGCGGCGGGA ATACTGCCCT CGAAGACGCC
TTGTATCTCT CCAAGCTGGC CCAAAAGGTC TATCTGATCC ACAGGCGCTG CGATTTCCGG
GGTTGCCAGT TCAATCAGGA CCGGGTGCGG CAGGCTCCGA ATGTGGAGAT CCTGCTCGAC
ACGGTGCCCA CAGAACTGCT GGGCAGCGAC GAGATCCATG GGTTACGGGT CCAGAACGTC
AAGACCGAAC AAACCCGCGA TCTGGACGTC CAAGGGGTGT TCATCTTTGT CGGCACCCAG
CCTTTGTCCG GATATGTCTC GGAAAATATC ACCTGCGATC AGGCGGGATT CGTCGTTACC
GATGCCGAGA TGCGGACCAA CGTGCCCGGC GTCTTTGCGG CCGGGGACGT GCGTTCCAAA
TTATGCCGCC AGGTTTCAAC CGCTGTTGGC GATGGGGCTA CCGCCGCCCA CGCTGCCGGC
CTTTACGTGG AAGAAATGAA CAATGGGCAA TAA
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| Protein sequence | MQIYDATVIG GGPAGMTALL YLMRAGLQCA WVEAMAPGGQ VLRTEQIDNY PGFPEGIKGY
ELADLFAKHL ERFSYDSYTE EVTGLETNGD GVHTIRFRDD TIQSKTLILC SGAEYKRLGL
PREEEMTGRG VSYCALCDGQ FFKDQTVACI GGGNTALEDA LYLSKLAQKV YLIHRRCDFR
GCQFNQDRVR QAPNVEILLD TVPTELLGSD EIHGLRVQNV KTEQTRDLDV QGVFIFVGTQ
PLSGYVSENI TCDQAGFVVT DAEMRTNVPG VFAAGDVRSK LCRQVSTAVG DGATAAHAAG
LYVEEMNNGQ
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