Gene Dret_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1891 
Symbol 
ID8419734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2173630 
End bp2173983 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content48% 
IMG OID645038477 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003198753 
Protein GI258406011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00988673 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0163804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAC CCACGAAAAA GCCCCCTACT GAGACTGTGG ATATCCGCAT CACAGGTCCA 
AAATGGAAAA AAGATGCCGT ACTCCGGGAT ATCAAGAAGC ATGGCTATGT GGACACTAGC
GATTGTATCT CTTGGCAAGA ACTCTTTCCC GAGCTTGAGG GTGAGCCCAA ATATAGCATC
GCCCTACGTG GGGCACGAAA CAAGGAGGGC TTGACTCAGG TGGAACTTGC TGAAAAGACC
GGCATCCCTC AAAGTCATAT TTCGAGCATG GAAAACGGGA AAAAAGAAAT CGGTAAGGAA
CGGGCCAAAC GTTTAGCTGA AGTGCTGAAC ATTGATTATC GGGTCTTTCT CTAA
 
Protein sequence
MQEPTKKPPT ETVDIRITGP KWKKDAVLRD IKKHGYVDTS DCISWQELFP ELEGEPKYSI 
ALRGARNKEG LTQVELAEKT GIPQSHISSM ENGKKEIGKE RAKRLAEVLN IDYRVFL