Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1891 |
Symbol | |
ID | 8419734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2173630 |
End bp | 2173983 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645038477 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003198753 |
Protein GI | 258406011 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00988673 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0163804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAC CCACGAAAAA GCCCCCTACT GAGACTGTGG ATATCCGCAT CACAGGTCCA AAATGGAAAA AAGATGCCGT ACTCCGGGAT ATCAAGAAGC ATGGCTATGT GGACACTAGC GATTGTATCT CTTGGCAAGA ACTCTTTCCC GAGCTTGAGG GTGAGCCCAA ATATAGCATC GCCCTACGTG GGGCACGAAA CAAGGAGGGC TTGACTCAGG TGGAACTTGC TGAAAAGACC GGCATCCCTC AAAGTCATAT TTCGAGCATG GAAAACGGGA AAAAAGAAAT CGGTAAGGAA CGGGCCAAAC GTTTAGCTGA AGTGCTGAAC ATTGATTATC GGGTCTTTCT CTAA
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Protein sequence | MQEPTKKPPT ETVDIRITGP KWKKDAVLRD IKKHGYVDTS DCISWQELFP ELEGEPKYSI ALRGARNKEG LTQVELAEKT GIPQSHISSM ENGKKEIGKE RAKRLAEVLN IDYRVFL
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