| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1876 |
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| Symbol | |
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| ID | 8419719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2150311 |
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| End bp | 2151009 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038462 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_003198738 |
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| Protein GI | 258405996 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0032893 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00621743 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAACTCC CCCCGCTGAC CGCCGCGACC CTGCTCGGTC GCCGCAAACG ATTTCTGGCC
GACGTCCGCC TGGACGACGG CACCGAGTGC ACGGCCCACT GCCCCAACAC CGGGAGCATG
CGTGCCTGCA GCGAACCAGG CCGCCGCGTC TATCTCTCCC AACACGATAA CCCTAAGCGC
AAATACCCCT ACACCTGGGA ACTGATCGAC ATGGGCAGCG GCCTGGTGGG TATCAACACC
CAGCGGACCA ACAAACTCGT CCGCGAAGGC ATTGAAACCG GCCGTGTCCC GTCTTTGGCT
GGCTACACCG ATTGCCGCCC CGAGGTCCGG ACCGAGGACG GCACCCGTCT TGATTTCCTC
TGGAACGGCC CCGACCAGCC GCCGCTCTAT ATGGAGGTCA AGAACTGCAC CCTGGTCGAA
CAGGGACGGG CCGCTTTTCC GGACGCCGTG ACCAGCCGGG GACAAAAACA CCTCGTAGAA
CTCATCCGCT TGCGCCGCGA AGGGGCCGCT GCAGCCATTT TTTTCCTCGT CCAGCGCACG
GACGCAACCT GGTTCGAGGC CGCCAGGGAA ATCGACCCGG CCTACGCCCG GCTACTGCAT
GAAGCCCAAG AAGCAGGGGT TGCCATACTC GCCTTTGATG TCCATATACA GATATCACGC
ATCACCCTGG CCAACGCCAT CCCGATCCTG ACCCCGTGA
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| Protein sequence | MELPPLTAAT LLGRRKRFLA DVRLDDGTEC TAHCPNTGSM RACSEPGRRV YLSQHDNPKR
KYPYTWELID MGSGLVGINT QRTNKLVREG IETGRVPSLA GYTDCRPEVR TEDGTRLDFL
WNGPDQPPLY MEVKNCTLVE QGRAAFPDAV TSRGQKHLVE LIRLRREGAA AAIFFLVQRT
DATWFEAARE IDPAYARLLH EAQEAGVAIL AFDVHIQISR ITLANAIPIL TP
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