Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1856 |
Symbol | |
ID | 8419697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2128183 |
End bp | 2129169 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645038440 |
Product | chaperone DnaJ domain protein |
Protein accession | YP_003198718 |
Protein GI | 258405976 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000127856 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0651455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATACA AGGACTACTA TGACGTGCTG GGTGTTGACC GCAACGCCTC GCAGGACGAG ATCAACAAGG CGTTCAAAAA ACTGGCGCGC AAATACCATC CGGACTTGAA CCCTGACGAT CAAGAGGCGG AGCGGAAATT CAAGGAGGCC AACGAGGCCT ACGAGGTCTT GAAAGACCCT GAAAAACGCA AACGCTACGA CCACCTCGGA GCCAACTGGG AACACGGTCA GGACTTCGAT CCCCCGCCGG GCTACGAGAA CATGCATTTC AATTTTGGCG GCGGCCAAGC CGGCGCCGGC GGATTCAGCG ATTTCTTCGA GACCATTTTC GGGGATATGT TCGGTGGCCG CGCCAATTTC CAGGGCGGCG GCGGTTTCAG TGGCGGCCAG TTCGGCGGGG CCCAATTCGG CGGACGCGGT TTTCAGCAAA AAGGCCAGGA CGCCGAGGCC ACCCTCGATC TGAACCTGGA GGACGCCTAC GCCGGTGGGC AGAAAACCGT CACCCTGCAG GAGCAGGTGC CCGGACCGGA CGGGCGCGTC CGGGTCCAAC CGAAGACGCT GCAAGTCAAT ATCCCGGCCG GGGTCAAGGA TGGCGCCCGG ATACGGCTCT CAGGACAGGG GCACCCCGGT CCCGGCGGAG GTCCCAACGG AGATCTTTTT CTCAAGGTCC ACCTCCGGCC GCACCACCAG TTCAAGGTCG AAGGCAGCAC CATCATTTAC GACCTGCCCT TGGCGCCCTG GGAGGCCGCG CTCGGAGCCA AGGTCCGCGT CCCGACCCTG GAAGGGCAGG TGGAAATGCA TATCCCCGCT GGCGTCGGAA GTGGGCAAAA ACTCCGTTTG CGCGGTCGCG GCCTGGGACG GGGACAAAAA AAGGGTGACC AGATGGTCCG GGTCATGATC AAAGTCCCCA AGCAGGTCTC GGAAGAAGAA AAAGCGCTCT GGGAACAGCT CGCGACGCAG TCCAGCTTCA ACCCGCGCAA TTCCTGA
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Protein sequence | MQYKDYYDVL GVDRNASQDE INKAFKKLAR KYHPDLNPDD QEAERKFKEA NEAYEVLKDP EKRKRYDHLG ANWEHGQDFD PPPGYENMHF NFGGGQAGAG GFSDFFETIF GDMFGGRANF QGGGGFSGGQ FGGAQFGGRG FQQKGQDAEA TLDLNLEDAY AGGQKTVTLQ EQVPGPDGRV RVQPKTLQVN IPAGVKDGAR IRLSGQGHPG PGGGPNGDLF LKVHLRPHHQ FKVEGSTIIY DLPLAPWEAA LGAKVRVPTL EGQVEMHIPA GVGSGQKLRL RGRGLGRGQK KGDQMVRVMI KVPKQVSEEE KALWEQLATQ SSFNPRNS
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