| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1847 |
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| Symbol | |
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| ID | 8419688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2117767 |
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| End bp | 2119398 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038431 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_003198709 |
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| Protein GI | 258405967 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.145671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCA AAATCGTGTG CATGCTCGGC TACATCACCA TCATCGCCCT GCTCGGGTAC
AAAGGCTGGA AGGAAACCCA ACAGGCCAAA GACTACCTCG TCGCCGGCCG GGCCATGCAT
CCCTTTATCA TGGCTTTTTC CTACGGCGCG ACATTTATTT CCACTTCGGC CATCATCGGT
TTCGGCGGGG CCGCTGGCCT GTTCGGCTTC CCCCTGCTCT GGCTCACCTT CCTGAATATT
TTTGTCGGCA TCTTTCTGGC CATGCTGTTT TTCGGTAAAC GGACCCGCCG CCTCGGATTG
ACCCTGAACA GCATGACCTT TCCCGAACTG TTGGGACGCC GCTACCAATC CGGCTTCATC
CAGGGATTCG CCGGTGCGAT CATTTTCCTC TTCATTCCGG TCTACTCCGC CGCTGTCCTG
ATCGGAATCT CCAGGATCAT CGAGATTTCT TTGCATATCC CCTACAATCT CGTTTTAATC
CTGGTGACCC TGATCCTGAC CGCCTACGTC ATCACCGGCG GTCTGAAGGC GGTCATGTAC
ACCGACGCGT TCCAGGGATG CATCATGTTT ATCATGATGC TCATTCTTTT AGTTTCCACC
TACTCCATCC TCGGCGGCAT CACTCCGGCC CACCAGGCCC TGACTGACAT GGCCCCGCTC
ATGCCCGCCA AACTCCAGAA AGGCGGCATG CTCGGTTGGA CCCAGGGCGC TGCCTTTGGT
TCGCCGCTGT GGTTGGTCAT CTACACGACC ATTGTCTACG GCGTGGGCAT CGGAGTCCTG
GCCCAGCCCC AATTGGCCGT GCGCTTTATG ACTGTACCTT CGGACAAGAG CCTCAACCGC
GCAGTACTCT ATGGCGGGGT CTTCATTCTT TTCATGACCG GCACGGCCTT TATTGTCGGC
GCGCTCTCAA ACGCTGTATT CTACCAATAT TTCGAGAAAA TTGCCATTGC AGTGGCCAAA
GGAGACATCG ACAAGATCAT TCCCGTCTAC ATCGAACGGA TCATGCCGGC CTGGTTCGCG
GCCCTGTTCC TGGTGGCCAT GTTCGCCGCA GCCATGTCGA CCCTGTCTTC CCAATACCAT
GTCGGGGGGA CCTCCCTGGG ACGGGACCTC TTTGAAAAAG GGCTGCGCCT GTCACGGCAA
CGTTCGATCA CCCTCAACCG AGCCGGGGTC TTCCTGACAA TCATCGCCAC CCTGATTTGG
GCCTGGGTCC TGCCGGCCTC GGTCATCGCC CGGGCTACGG CCTTCTTCTT CGGCCTCTGC
GCTGCGGCTT TTCTGCCGGC CTATGCCTGC GCCCTGTACT GGAAGAAAAC AACCAAGGCC
GGCGCCGTGA CCTCTATGGT TGGCGGATTT TTTATCTCCA TGTTCTGGCT GTTGTTCATT
CACGAAAAAG AGGCCGCAGC CATCGGTCTG TGCAAGGCGC TGACCGGGCA GACCACGCTG
GTCGCTAGCG CCGAGGCGGG GAGTTGGATC TGGCTGCTGC AATGGGTCGA CCCCAATGTC
GTCGCATTGC CAGTCTCCTT TGCGCTCATT ATCACCGTTA GCCTGACGAC TCGGGGCTAC
AGCACAGACC ACCTCCACCA TTGCTGGAGC AACTTCGTCA GCGCACAACA GACCAGGGAA
TGGAGAAATT GA
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| Protein sequence | MLIKIVCMLG YITIIALLGY KGWKETQQAK DYLVAGRAMH PFIMAFSYGA TFISTSAIIG
FGGAAGLFGF PLLWLTFLNI FVGIFLAMLF FGKRTRRLGL TLNSMTFPEL LGRRYQSGFI
QGFAGAIIFL FIPVYSAAVL IGISRIIEIS LHIPYNLVLI LVTLILTAYV ITGGLKAVMY
TDAFQGCIMF IMMLILLVST YSILGGITPA HQALTDMAPL MPAKLQKGGM LGWTQGAAFG
SPLWLVIYTT IVYGVGIGVL AQPQLAVRFM TVPSDKSLNR AVLYGGVFIL FMTGTAFIVG
ALSNAVFYQY FEKIAIAVAK GDIDKIIPVY IERIMPAWFA ALFLVAMFAA AMSTLSSQYH
VGGTSLGRDL FEKGLRLSRQ RSITLNRAGV FLTIIATLIW AWVLPASVIA RATAFFFGLC
AAAFLPAYAC ALYWKKTTKA GAVTSMVGGF FISMFWLLFI HEKEAAAIGL CKALTGQTTL
VASAEAGSWI WLLQWVDPNV VALPVSFALI ITVSLTTRGY STDHLHHCWS NFVSAQQTRE
WRN
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