Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1797 |
Symbol | |
ID | 8419638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2066200 |
End bp | 2067174 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645038381 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_003198659 |
Protein GI | 258405917 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.504833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACG TACCTCCAAA TGCCCCGAAG ACCGATCTCG ACGAGGCGTT CCAGCAGTTT CTTGCCGTGC AGGAAGCTTT TCCCGATCCG ATTCTGGTAG TGAACGAGGA TGGGGTTTAC GAGGCCGTTA TGGGTGGACA GGCCCGGGGC CTTTACGACA GCGGGCACAA TCTTGTGGGC CACGCCATGC ACGATGTTTT GCCCCAGGAA AAGGCGGACT GGTTCCTGCA GGTTGTCAGG CAAGCCTTGA ACGAACACGA ATTGCAGATC GTCGAATACG CCCTTTCTCC CGACGAGGTT ATCGATTCCC CTTCAGATGG CCCTGAACAC GCGCAATGGT TCGAAGGCCG TGTTTATCCC ATTCACCGGC CTGCGGGACA GAAACAGGCG GTGGTCTGGG TCGTTTTGAA CATGACCAAG CGCAAGAAAC TCTTTGAGGA ACTCCAGGCC CAGTCCGAGC GGGACGCCTT GACCGGGGTG TACAACCGCT TGGCATTTAC CCGCTATTTC GACCAATACA AATACAACGC CCAACGGTAT CGGCGTCCGC TGTCACTGCT GGTGCTGGAC CTTGACGAAT TCAAGGGGCT CAATGACCGT TTTGGGCACG CCGCGGGCGA TGTCGTCCTG CAATCCCTGG CCGAAGCACT CAGGTCACGC CTGCGGCAAA CGGATATCCT GGCCCGCCTC GGAGGGGACG AATTTGCCAT ACTGCTTCCT GAGACCCCCT ACGGCGCGGC GGTGGAATTG ATGGGTCGCT TGCGCAAAGC GCTCAATGCC ATGATCGTGC CTTTTGAATC GGAAGAGATA CCGGTGCGCG TCAGTCTGGG GGTGAGTACT TTGTCCCTGA CAGACAAGGA ATTCGAAGAA CTTTTCGCCC GCGCTGACGC CAATATGTAC AAACACAAAC GTATCCGGCA GAAAAAGGAG CACCAGTTTC CACGGAGCGC TGTGCCGACG TACGAAATCG AATAG
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Protein sequence | MMDVPPNAPK TDLDEAFQQF LAVQEAFPDP ILVVNEDGVY EAVMGGQARG LYDSGHNLVG HAMHDVLPQE KADWFLQVVR QALNEHELQI VEYALSPDEV IDSPSDGPEH AQWFEGRVYP IHRPAGQKQA VVWVVLNMTK RKKLFEELQA QSERDALTGV YNRLAFTRYF DQYKYNAQRY RRPLSLLVLD LDEFKGLNDR FGHAAGDVVL QSLAEALRSR LRQTDILARL GGDEFAILLP ETPYGAAVEL MGRLRKALNA MIVPFESEEI PVRVSLGVST LSLTDKEFEE LFARADANMY KHKRIRQKKE HQFPRSAVPT YEIE
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