Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1779 |
Symbol | |
ID | 8419620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2049947 |
End bp | 2051278 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645038363 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003198641 |
Protein GI | 258405899 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00812626 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCAA ACGCTCCCGA CGTATCGCGT CGGACCATAT TGCACTGGGC GGTTCTGGCC GCCACCACCC CGGTGTGGTG GACGTTGAGC GGCTGCGCCA CCAATCCGGT GACAGGAGAA TCAGAATTGA TGCTCGTGTC CCGGGATCAG GAGATCTCCC TGGACCGGCA GAAAAGTCCC CATCAACTTT CCGCGGATTA TGGGGAAATA CAAAACCAGG AACTCCAAAG GTATATCGCT TCCGTAGGTC AGGAGTTGGC GGGGCGGACG CACCGGCCGG ACATGCCGTA CCGTTTTTTC CCGGTCAACG CGGTCTACGC CAACGCCTAT GCCTTTCCCG GCGGTACCAT TGCGGTAACT CGGGGTATCC TGCTCGAATT GGACAACGAG GCCGAATTGG CGGCTCTCCT CGGTCACGAA CTTGGGCACG TCAACGCCAG GCACACGGCG GCGAGGATGT CCACCGGGGT TCTTTTGCAG GGACTTTTGG GAGGTGCCGG CGCTGTGGCC GCCTCCGCTG GCGGGGGGGC TTCGGCCGAG GCCCTGATGC AGTTAGGCGG CTTGGGAGCC GGAGCGCTGC TGGCCAAATA CAGTCGGGAC GATGAACGGC AGGCAGACGC CCTTGGTATG CAGTATATGG TTCAAACTGG GTACGCGCCC CGGGGGATGG TTGGTCTCAT GGATGTCCTG CGCGGTATGT CCTCCCGTAA ACCCTCTGTC ATCGATCAGA TGTTTTCTTC GCACCCCATG TCCGAGGAGC GGTACCGCAC GGCGGTCAGT CGGGTTCAAA ATGAGTACCA GACTGGCCGG CAACTGGCGC TGAACCGGGA GCGGTACAAA GACCATTTGG CGCCGATTCG CGCCATGCAG GAGGCCATTG AGGCCATGCA GGAAGGGGAG AAAGCCTTGG GCGCGGAAAA TCCCGATCAG GCCGAGCGTT CCTTGCGGCG GGCGTTGCAA GCCGCCCCTC GGGATTACAC CGCCTTGGTC ATGATGGGCA AATGCCGCTT GCTCCAGGAT GCCCCGAAAG ATGCGGAGCG CTATTTTACC CACGCGCGGG AGGTTTACCC GCAAGAGCCG CAGGCAGCGC ATTTTCTGGG GATCACCCTG CTGGGCCAAA AAGAATACGA CGGCGCTTAT GAACAATTCC GGTGGTATGA AGAGCGACTG CCGGGAAATC CGAACACTAT TTTCCTCCAG GGATTGGCCC TCGAGGGCGC CCAGCGCCAG CAGCAGGCCG CCGAGGCCTA CGCCCGTTTT CTGCAAAGCG GCGCCAGCGG GGAGCAGGCC CAATACGCCC GGCAACGGCT CCAGACGTGG GGCTATCTCT AA
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Protein sequence | MESNAPDVSR RTILHWAVLA ATTPVWWTLS GCATNPVTGE SELMLVSRDQ EISLDRQKSP HQLSADYGEI QNQELQRYIA SVGQELAGRT HRPDMPYRFF PVNAVYANAY AFPGGTIAVT RGILLELDNE AELAALLGHE LGHVNARHTA ARMSTGVLLQ GLLGGAGAVA ASAGGGASAE ALMQLGGLGA GALLAKYSRD DERQADALGM QYMVQTGYAP RGMVGLMDVL RGMSSRKPSV IDQMFSSHPM SEERYRTAVS RVQNEYQTGR QLALNRERYK DHLAPIRAMQ EAIEAMQEGE KALGAENPDQ AERSLRRALQ AAPRDYTALV MMGKCRLLQD APKDAERYFT HAREVYPQEP QAAHFLGITL LGQKEYDGAY EQFRWYEERL PGNPNTIFLQ GLALEGAQRQ QQAAEAYARF LQSGASGEQA QYARQRLQTW GYL
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