| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1756 |
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| Symbol | |
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| ID | 8419597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2020861 |
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| End bp | 2022555 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038340 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003198618 |
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| Protein GI | 258405876 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.598576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGG ATGCAATCCA GCGGCTGTGG CTCGAGAGCT ACGATGACGA AGTGAGCTCG
AGTCTGCGTT ACGAAAGCGT ACCGCTGTAT ACCTATCTCG ATCGGGCCGC GGCCAAGACG
CCCAAACGCC CGGCTATCGT CTTCAACCAC TGCAAGACCA GTTACGCCCG CCTCAAGCAG
ATGGCCGAGA CCGTGGCCGC CAACTTCAGG GCCAACGGAG TGCGTCAGGG AGACCGGGTC
GCGCTGATGC TGCCGAACCT GCCCCAGACG ATCATCACCT ACTGGGGCTT GCTCAAGGCC
GGCGCGGTCG TCGTCATGAC CAACCCCCTG TACATGGAAA AGGAACTCAG CCACCATTTG
GCCGATTCCG GAACGCGGTT TCTGGTCACC CTGGACCGCC TTTACGCCAA AGTCGCCCCG
CTCCGTCCCC AACTGCCCGA ACTACGGAAA ATTTTCGTCA CCGGGATCGA AGACGGACTC
CGGTTTCCCT TCAAGCAGCT CTACACCCTC AAGACCCGGC GATCCGGAGA AAAGGTCGAT
ATCCCCTTTG ACGACGCGAC TGTCTTGCCC TGGAAGTCCC TCCTCAAAGC CGGTGCTCCG
CCGGTTCATC CGCATATCAA TCCCCACCGC GACTTGGCTG TCCTGCAATA CACCGGCGGC
ACGACAGGTA TATCCAAAGG GGTCATGCTC AGCCATGCCA ATATGGCGGC CAATGTCCAG
CAGTGCCTGG CCATGCTCCA CCGAATCGGT GAAAAACAAG AAACCGTTCT CGGCCTGCTG
CCCTATTTTC ATATTTACGG ACTGACTGTC TGCGTCAATT TCGCGACCTC CATCGGGGCG
ACCCTGGTCC CGTTTCCCCG CTTTGCGCCC ATCGATGTCC TGAAAACCAT CCACAAGGTC
CGGCCGACGA TTTTCCCGTC CGCTCCAGCC GTCTTCCAGG CCCTATTGCA GCACAAGGAT
ATTCAGAAAT ACGACCTGAG TTCCATCCAG TATTGCATTT CCGGTTCAGC GCCCATTCCG
CGGGAAACGA TCAACACCTT CAAGGAACTC ACCGGGGCTG AAATTATTGA GGGCTTTGGC
CTGACCGAGG CCTCACCCAT CACCCATCTC AATCCGCTGC GTAAAAAACG GAAGATCGGT
TCCATCGGTC TGCCCTTTCC AGACACCGAC GCCTGCATTG TGGACATGGA GGTCGGCAGT
CTCGCCCTGC CGCCGGGCAA GGTCGGGGAA CTCGTCATCC GGGGGCCGCA GGTTATGAAG
GGCTATTGGA ACCGGCCCGA CGAGACGGCC ACAGCCCTGC GCAACGGCTG GCTGTACACC
GGCGACATTG CCTATATGGA TGAAGAAGGG TATTTTTTCA TCGTCGATCG GAAAAAAGAC
ATGATCATCT CCGGCGGCTA CAACATCTAC CCCCGCGAAA TCGACGAGGT GCTCTATGAG
CATCCAGACA TCAAAGAGGC CGTGACTGTC GGCATCTCCC ACCCCACCCG GGGGGAAATC
GTCAAGGCCT TTGTCGTTCC CCAGGACGGA GTCCAGCTCA AAAAGAGCGA CGTCATCAGC
TTCTGCCGCC AGAAACTCGC CAACTATAAG GTCCCCAAGA AGGTCGAATT CAGAGAGGAA
CTCCCCAAAA CCATGGTCGG CAAAGTCCTC CGCCGCGCCC TGCGTGAGGA GGAGGAACAG
AAACAGACGC GCTGA
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| Protein sequence | MIQDAIQRLW LESYDDEVSS SLRYESVPLY TYLDRAAAKT PKRPAIVFNH CKTSYARLKQ
MAETVAANFR ANGVRQGDRV ALMLPNLPQT IITYWGLLKA GAVVVMTNPL YMEKELSHHL
ADSGTRFLVT LDRLYAKVAP LRPQLPELRK IFVTGIEDGL RFPFKQLYTL KTRRSGEKVD
IPFDDATVLP WKSLLKAGAP PVHPHINPHR DLAVLQYTGG TTGISKGVML SHANMAANVQ
QCLAMLHRIG EKQETVLGLL PYFHIYGLTV CVNFATSIGA TLVPFPRFAP IDVLKTIHKV
RPTIFPSAPA VFQALLQHKD IQKYDLSSIQ YCISGSAPIP RETINTFKEL TGAEIIEGFG
LTEASPITHL NPLRKKRKIG SIGLPFPDTD ACIVDMEVGS LALPPGKVGE LVIRGPQVMK
GYWNRPDETA TALRNGWLYT GDIAYMDEEG YFFIVDRKKD MIISGGYNIY PREIDEVLYE
HPDIKEAVTV GISHPTRGEI VKAFVVPQDG VQLKKSDVIS FCRQKLANYK VPKKVEFREE
LPKTMVGKVL RRALREEEEQ KQTR
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