Gene Dret_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1753 
Symbol 
ID8419594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2018601 
End bp2018864 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content59% 
IMG OID645038337 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_003198615 
Protein GI258405873 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.787076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACA TTTATGTTGG GAACCTGCCG TTCAGTTCCA CGGAAGACGA AGTCCGCGAT 
CTTTTCGCCC AATACGGCGA GGTCCAGTCG GTCAAACTCA TTTCCGACCG CGACACTGGT
CGCCCCCGCG GTTTTGGATT TGTTGAAATG GAGGACGGCG GCGCAGACAA GGCCATTGAA
GCCTTGGATG GTACGACCTT CGGCGGCCGG AGCCTGCGGG TCAACGAAGC CCGCGAGCGC
AAGCCGCGCC AGTCCAACTG GTAA
 
Protein sequence
MKNIYVGNLP FSSTEDEVRD LFAQYGEVQS VKLISDRDTG RPRGFGFVEM EDGGADKAIE 
ALDGTTFGGR SLRVNEARER KPRQSNW