Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1727 |
Symbol | |
ID | 8419563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1989185 |
End bp | 1991095 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038306 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_003198589 |
Protein GI | 258405847 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0229617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAATT TTTATAAGAA CCTTTTTTTG TGGGCAACGA TCTCACTGGT CATGGTCGTG CTCTTCAACC TCTTCAACCA GCCCCAGGCG CCACAGCAGC AATTGTCCTA CAGCCAATTG CTGACCGAGG TCCGTCAGGG ACGGGTGGTC GGCGTGACCA TCCAGGGGCA GAAAGTGACC GGGGTGATGA CCAACGACCA GCGATTCGTC AGCTACGCGC CGGACGACCC GAATTTCGTA AACACCCTTT TGGAGAACAG CGTCGAGGTC AAAGCCCAGC CACGGGACGA GGCGCCATGG TATATGACCA TTTTCGTCTC CTGGTTTCCA ATGCTGCTGC TGATCGGGGT CTGGATCTTT TTTATGCGCC AGATGCAGGG CGGTGGCGGA AAGGCTATGT CATTTGGCAA GTCCAAGGCC AAGATGGTGA CCCAGGAATC GACAAAGGTC ACTTTCACCG ATGTGGCCGG CGTGGATGAG GCCAAGGAGG AGCTGACTGA AATTGTAGAA TTTCTCAGCA ATCCCAAGAA ATTTACCCGA CTCGGGGGGC GGATTCCCAA GGGCGTTCTG CTCGTTGGCG GGCCCGGTAC TGGAAAGACC CTTTTGTCCC GCGCCGTGGC CGGGGAAGCT GGGGTGCCCT TTTTCTCCAT CTCCGGTTCC GATTTTGTGG AAATGTTCGT CGGTGTCGGT GCGTCGCGGG TGCGGGACCT TTTTGTCCAA GGCAAGAAAA ACGCCCCATG TCTGATCTTT ATTGATGAAA TCGACGCGGT CGGACGTCAG CGCGGCGCTG GCCTTGGCGG CGGGCACGAC GAACGGGAGC AGACCCTGAA TCAGTTGCTG GTGGAAATGG ACGGTTTCGA GTCCAACGAA GGTGTCATCC TCATCGCTGC CACCAACCGC CCAGATGTCC TGGACCCGGC TCTGCTTCGT CCCGGGCGCT TCGATCGCCA GGTGATGGTC CCCAATCCGG ACCTCAAGGG CCGTAAATCG ATCCTGGAAG TCCATGCCCG CCACACTCCC CTTGCCGGAG ACGTGGATAT GGGGGTCATC GCGCGCGGTA CGCCTGGCTT TTCCGGTGCC GATCTGGAAA ACCTGGTCAA CGAAGCCGCT CTGGCGGCGG CCAAGGTGAA CAAAGACCAG GTGGACATGA ACGATTTCGA AGACGCCAAG GATAAAGTCC TGATGGGCAA GGAACGGCGT AGCGTGATTT TGAGTGAAGA AGAAAAGAAG ACCACGGCCT ACCACGAAGC CGGTCACGCG TTGGTGGCCC GGTTGTTGCC GGGAACCGAT CCGGTGCACA AGGTGTCCAT CATCCCCCGG GGACGCGCCC TGGGCGTGAC CATGCAGCTT CCTGAAGACG ACCGCCACAA CTATTCCCGC GTCTTTTTGG AAAATTCCTT GGCGGTGCTT CTCGGCGGGC GTGTGGCCGA AGAATTGGTC CTGGATCAGA TCACCACCGG AGCCGGCAAC GACCTCGAAC GGGCGACAAA GATGGCCCGG AAGATGGTCT GCGAATGGGG CATGAGCGAG GCTATCGGCC CGCTGGGCCT CAATGACAAC GGCGATCAGG TTTTTCTCGG CCGGGAGTTG GTCCAGCATA AACATTACAG CGAGGATACC GCCCGGCTCA TCGATAGCGA GATCAAGCGG ATCATCAGCG ATGCCTATGA AAAGGCGCGG CGGCTGCTCA AGGAAAATGG CGAGACCCTT GAAGCCCTTG CCGAAGCCTT GTTGGAGCGT GAGACCTTGA CCGGGAATGA TATCGCCACC ATCATGCGTG GGGAAACTCT CCCTCCGGTG GAGGTAGAGC AGGAAAAGGG CCAGGGCCCA TCGGCCTCGG CCGACACTCA GCAAGAGACT GAGGATTTTG CTGCGGAGGA TTTCACCCTC GAAGAAGAGG ACGACGAATG A
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Protein sequence | MNNFYKNLFL WATISLVMVV LFNLFNQPQA PQQQLSYSQL LTEVRQGRVV GVTIQGQKVT GVMTNDQRFV SYAPDDPNFV NTLLENSVEV KAQPRDEAPW YMTIFVSWFP MLLLIGVWIF FMRQMQGGGG KAMSFGKSKA KMVTQESTKV TFTDVAGVDE AKEELTEIVE FLSNPKKFTR LGGRIPKGVL LVGGPGTGKT LLSRAVAGEA GVPFFSISGS DFVEMFVGVG ASRVRDLFVQ GKKNAPCLIF IDEIDAVGRQ RGAGLGGGHD EREQTLNQLL VEMDGFESNE GVILIAATNR PDVLDPALLR PGRFDRQVMV PNPDLKGRKS ILEVHARHTP LAGDVDMGVI ARGTPGFSGA DLENLVNEAA LAAAKVNKDQ VDMNDFEDAK DKVLMGKERR SVILSEEEKK TTAYHEAGHA LVARLLPGTD PVHKVSIIPR GRALGVTMQL PEDDRHNYSR VFLENSLAVL LGGRVAEELV LDQITTGAGN DLERATKMAR KMVCEWGMSE AIGPLGLNDN GDQVFLGREL VQHKHYSEDT ARLIDSEIKR IISDAYEKAR RLLKENGETL EALAEALLER ETLTGNDIAT IMRGETLPPV EVEQEKGQGP SASADTQQET EDFAAEDFTL EEEDDE
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