Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1726 |
Symbol | |
ID | 8419562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1988319 |
End bp | 1989188 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645038305 |
Product | dihydropteroate synthase |
Protein accession | YP_003198588 |
Protein GI | 258405846 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0955248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGT CACCCGGGAG CACGACGCCG ATCTGGCGGG TGGCTGGGGG CAGGGTGGTG CACCCTGCCC CTTTTTGCAT ATTGGGCATT TTGAATGCCA CGCCGGATTC CTTTTATGAC GGCGGCCGCT ACGACCGGCC GGACACGGCC GTGGCCCAAG CAGTGCATAT CCTGGATGCC GGCGCGGATA TTCTGGACAT TGGCGGAGAA TCGACCCGGC CTTACGCCGA GCCGGTCGGG GCGGCTGAGG AGATCGAGCG GGTGGTGCCG GTGATAGGAG AGGTTCTGGA GCGGAGTCCA GAGGCCCTCA TCTCCGTAGA CACCTACAAG GGAGCCACGG CCGAGGCGGC GCTGCAGGCC GGGGCTTGTA TCGTGAACGA TGTCTCAGGG TGCCGCTACG ATCCCGCATT GCTCCCGGTG CTCACCTCGT GCCGTCCGGG CTATGTCCTG ATGCACAGCC AGGGACGACC CAGCGATATG CAAGACGCGC CTCGATACGG TGACGTTGTT GACGAAGTGA TGGCCTTTTT CGTGGACCGG ATGCAGTGGC TGACGGGTCA GGGGTTGCCG GAGGAGCATA TTGTTCTGGA CCCAGGCATC GGATTCGGCA AGACCCTGGA GCACAACCTG GCGTTATTGC GGCATGTCGA GCGGCTTCAA ACCCTCGGGC GCCCCGTGCT CATGGGGCTG TCGAACAAAT CCCTGTGGAG CAAACTCCTG GGGTTGGAAG GAGCCGAGCG GGAATGGGCC ACCCAGGTCG CGACTGCCCT GCTGGCGGCC CGAGGTGTGA CGCTGCACCG TGTCCACGAC GCCGGGCGAA GCAGGCAAAG CTTGCAACTC ATGCAGGCGA TCACACCAAC AGCCCCCTGA
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Protein sequence | MNESPGSTTP IWRVAGGRVV HPAPFCILGI LNATPDSFYD GGRYDRPDTA VAQAVHILDA GADILDIGGE STRPYAEPVG AAEEIERVVP VIGEVLERSP EALISVDTYK GATAEAALQA GACIVNDVSG CRYDPALLPV LTSCRPGYVL MHSQGRPSDM QDAPRYGDVV DEVMAFFVDR MQWLTGQGLP EEHIVLDPGI GFGKTLEHNL ALLRHVERLQ TLGRPVLMGL SNKSLWSKLL GLEGAEREWA TQVATALLAA RGVTLHRVHD AGRSRQSLQL MQAITPTAP
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