Gene Dret_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1690 
Symbol 
ID8419521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1942886 
End bp1943821 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content57% 
IMG OID645038264 
ProductSurA domain protein 
Protein accessionYP_003198552 
Protein GI258405810 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0553768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAA AACTTCTCGT GCTGGTGCTG GCTTTGGTCT TTTGCAGTGC TGTTCCCGCT 
ACCGGCGAAC AGGTCGTGGA CAGGATCGTG GCTGTGGTCA ACGGAGAAAT CATCACCCTG
TTTGAACTCA ACCAAAAGGC CGACCCGGTC GTTGAACGTT TCCGAAGCCA ACAGCCCGGA
TCGTTGACCG AGGATCGGAT CGAAGAGATC AAAAAGCGCG TCCTGCAGAC TATGGTCGAC
AATATGCTCC TGCGGCAGGA GGCCGAACGT TTGGAAATGG AGATCGAAGA CGCCGAGGTC
CAGGATCGGA TCGAAGAGAT GAAAACCCAA CGCGGCTGGG ACGACGAACG CCTGGACCAG
ATGCTGGCCA ACGAGGGGCT GGACAGGTCC TCGTTCGAGA AAAATATCCG TGAAGATCTC
ATGCGCCGCA GGCTTGTGGG AGCGATGGTC CGGCGCAAAG TCGTGGTCAC CAATGAGGAA
ATTCAGACCT TCTACAAGGA CAATCAAGAG CAATTTGCCC AGGAAAAAAA GGTCGATCTC
CGTTTGCTGG CCGTGCCGTC GGTAGACAAG GCGAAACAGC TCCGCCAGCG CATCACTGAT
GGAGACCTCG ATTTTGCCCA GGCGGCCAAG CAGTTCTCCC AAGGGCCAGC TGCCGGACAG
GGGGGCGATC TGGGCTGGGT CAAATGGGCG GATCTGGCTC CGCAATGGAA GGAAGTCTTG
CGCTCAACCT CCCCGGGGAG TATGACAGAA CCGTTTTCCC TTCAGGGGCA GACAGCCATT
TTATATCTTG AGGACATGCA AAAAGGGCAG GTACAACCCC TTTCCGCGGT CAGGGACCGC
ATCGCTGACA CCTTGCGGGG ACCGAAGTTC GAGAAGCAAT TGGAAACCTA CCTCCAACGG
CTGCGGGACA AGGCGGTTGT CGATATACGG CTCTAG
 
Protein sequence
MRKKLLVLVL ALVFCSAVPA TGEQVVDRIV AVVNGEIITL FELNQKADPV VERFRSQQPG 
SLTEDRIEEI KKRVLQTMVD NMLLRQEAER LEMEIEDAEV QDRIEEMKTQ RGWDDERLDQ
MLANEGLDRS SFEKNIREDL MRRRLVGAMV RRKVVVTNEE IQTFYKDNQE QFAQEKKVDL
RLLAVPSVDK AKQLRQRITD GDLDFAQAAK QFSQGPAAGQ GGDLGWVKWA DLAPQWKEVL
RSTSPGSMTE PFSLQGQTAI LYLEDMQKGQ VQPLSAVRDR IADTLRGPKF EKQLETYLQR
LRDKAVVDIR L