| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1647 |
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| Symbol | |
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| ID | 8419478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1897174 |
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| End bp | 1898148 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038221 |
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| Product | putative sulfonate/nitrate transport system substrate-binding protein |
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| Protein accession | YP_003198509 |
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| Protein GI | 258405767 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCC GCCGAATTGT TCTGTTTGTT GTCCTGCTCT GTCTTTTCAG CGCCGGTGGC
GCGATGGCTG AAATGACACC GGTCCGCCTG GCCCACGCCA CCTGGGTGGG GTATGGACCG
TTGTATATCG CCCAGGAAAA CGGGTATTTC GAAGACGAAA ATATCGATAT GGACCTCTTT
ATCATCGAGG ACGAGGCCCA GTACGCTGCC GCGTTGGCCT CGGGCAATAT CGACGGCCTG
GGCAACGTCA TCGACCGTGA AGTCATCCAC TTCGCCAAAG GGACTTCGGA AGTGGTTGTC
TTTGCCATGG ATGAATCCGC CGGCGGGGAC GGGATCATCG CCACTGAGGA GATCCAGAGT
GTTGCGGATC TGGCCGGCAA GGACATCGGC CTCGACAAAT CCTCGACCTC CTATTTCTTT
TTCTTGAGTA TCCTGGATAA ATACGGTGTC GACGAGCAGT CCATGACCTT CCACGAGATG
GGCTCCTCCA ACGCTGGCGC GGCTTTTGTG GCCGGCAAGC TCGATGCCGC AGTGACCTGG
GAGCCTTGGC TCTCCAAGAG CGATCAGCGC GAGGGCGGCC ACGTGCTCAT TTCCAGTGCG
GAGATGCCCA AGACTATTGT CGATGTCGTG GTTCTCAACA GCGACTTCGT GGCCGAGCAC
CCTCAGGTCC CCGCCGGTCT GACCCGGTCC TGGTTCCGGG CCATTGACTG GTATCGAGCC
CATCCTGACA AGGGCAATGC CATTATGGCC GAGGCGATGG GGCTCAGTAC CGAAGAGATG
GCCAGCATGG CCGAAGGGGT CCGCTTTATC GGCGAAAAGG GGAACAAAAC GTTTTTTGAC
CCCTCGACCT CCGGCAATAT TTACGAGGTG GCAGACCGGG CCCTGGATTT CTGGCGCTCG
AAGGGCATTA TCCAATCGCC GGTCAAGGCC GAGGAATTGG TGACCTCCGA ATACGTCAAC
CAGGTTGCTG ACTAG
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| Protein sequence | MPIRRIVLFV VLLCLFSAGG AMAEMTPVRL AHATWVGYGP LYIAQENGYF EDENIDMDLF
IIEDEAQYAA ALASGNIDGL GNVIDREVIH FAKGTSEVVV FAMDESAGGD GIIATEEIQS
VADLAGKDIG LDKSSTSYFF FLSILDKYGV DEQSMTFHEM GSSNAGAAFV AGKLDAAVTW
EPWLSKSDQR EGGHVLISSA EMPKTIVDVV VLNSDFVAEH PQVPAGLTRS WFRAIDWYRA
HPDKGNAIMA EAMGLSTEEM ASMAEGVRFI GEKGNKTFFD PSTSGNIYEV ADRALDFWRS
KGIIQSPVKA EELVTSEYVN QVAD
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