Gene Dret_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1644 
Symbol 
ID8419475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1894803 
End bp1895297 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID645038218 
ProductRubrerythrin 
Protein accessionYP_003198506 
Protein GI258405764 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA CCAAAGACAA TCTGAAGACG GCTTTTGCCG GCGAATCCCA GGCCAACCGC 
AAATATCTTG CCTACGCCGA GAAGGCGGAC AAAGAGGGCT ATCCGCAGGT GGCCAAACTC
TTTCGCGCTG CGGCCAGGGC CGAAACGATC CATGCCCACG CCCATCTCCG CCTGCTCAAG
GGCATCGGCA GCACCGAAGA CAACCTCAAG GACGCCATTT CCGGGGAGAG CTACGAGTTC
AACACCATGT ACCCCGAAAT GATCGAACAG GCCAAAAGCG AAAAGGAAAA CGCCGCCGCT
CGCTACTTCG GCTTTGCCAA TGAAGCCGAA AAGGTCCACG CCGAACTCTA CCAGAAGGCC
CTGGACAATC CCGCGGGCCT GCCGGAGGTC GATTATTGGA TCTGCAGCGT CTGCGGGCAC
ACCATGGAAG GCCAGCCTGA GGAGAAATGT CCCATCTGCG GGGCGCAGCC CTCAGCCTAT
TTCCAATCCG AATAA
 
Protein sequence
MSQTKDNLKT AFAGESQANR KYLAYAEKAD KEGYPQVAKL FRAAARAETI HAHAHLRLLK 
GIGSTEDNLK DAISGESYEF NTMYPEMIEQ AKSEKENAAA RYFGFANEAE KVHAELYQKA
LDNPAGLPEV DYWICSVCGH TMEGQPEEKC PICGAQPSAY FQSE