| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1583 |
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| Symbol | |
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| ID | 8419413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1833562 |
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| End bp | 1834218 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038156 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_003198445 |
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| Protein GI | 258405703 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.994692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGACG GATATATTGA TCCCCACTGC CAATACAGCC GTGGCGAGGA AATCGCCAAC
TCGTTGACCC ACGGCCTCGG TATTGCGGCG AGTTGTGTCG GACTCATCGT CCTCGTGGTC
AGCGCCAGTT ACTCTGGAGA CCCCAACCGT ATCATCGGCG TCACTATCTT TGGCGCCTCG
CTCATCCTGC TCTACCTCGC CTCGACACTC TACCATTGCC TGCCCTCTCC CCGAGCCAAA
CAGGTCCTGC GAAAACTCGA CCACGCTGCG ATATACATTC TCATCGCCGG GACCTACACT
CCGTTCATGC TCGTGGTCGT CGACGGCCCT CTATCCTGGA CAATCCTAAG CATTATCTGG
ACCTTGGCCC TGGTCGGCGT GGTCTTCAAA TGCTGCTGGA CCGGGCGACT GCGACGTCTC
TCCCTGGCCG TGTACATCGG CATGGGCTGG CTGTGCGTGC TCGCCTTTAG CGAACTGCTG
CGCAACACCC CCACCAGCGG CTTTATCTTT CTCGTGCTCG GCGGGCTCTT TTACACCGGC
GGGACGATCT TCTACGGCTG GAAACGACTC CGCTTCAACC ACGCTATCTG GCACCTTTTC
GTTCTCACCG GAAGCGTCAT GCATTTTCTC TCCGTGTACC AGAGTGTGCT GCGGTAG
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| Protein sequence | MRDGYIDPHC QYSRGEEIAN SLTHGLGIAA SCVGLIVLVV SASYSGDPNR IIGVTIFGAS
LILLYLASTL YHCLPSPRAK QVLRKLDHAA IYILIAGTYT PFMLVVVDGP LSWTILSIIW
TLALVGVVFK CCWTGRLRRL SLAVYIGMGW LCVLAFSELL RNTPTSGFIF LVLGGLFYTG
GTIFYGWKRL RFNHAIWHLF VLTGSVMHFL SVYQSVLR
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