Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1501 |
Symbol | |
ID | 8419330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1740285 |
End bp | 1741784 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038075 |
Product | IstA2 |
Protein accession | YP_003198365 |
Protein GI | 258405623 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0307163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000409094 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGAAGG TGGAACAATT TGAATTTATC CGTACCAGCT ATCGTGTCTA TGGTCTGTCC ATATCTGAAA TCGCCCGGAA AACCGGGCAC TCACGAAACA CGATACGCAA GGTCCTACGC AACGAGCACA GCGGCTATGC CGCCAGGAAG CAGCAACCGA TGCCGGCATT AGAGGGCTTT GCGGGGGCCA TCGATTCTTG GCTTGAGCAG GACAAGCAAA GGCCCCCAAA GCAGCGGCAT ACCGCGAGGC GGATCTTTCG CCGGCTGGTC CATGAGCACG GTTTCCAAGG CTCAGAGCCG GCAGTACGGC GCTATGTGCG CCAAGCAAAA ACTCGAATCG GTCTTGGGGC AAAGGGGGCT TTTGTCCCCG CAGAGCCGGA CGCGGGCCTG GAAGCCGAAG TGGACTGGGG CGATTTCAAA GCCTACATCG CCGGAAAACT GACCCCGCTC AAGCTCTTCT GCATGCGCTC CAAGTATTCC AGCACAAGCT TTGTGCGGGC CTATCCAGTC GAGCGGCAGC AGGCCCTTAT TGATGCCCAC ATGCAAGCTT TTGCTTTTTT CGGCGGTGTT TTCCCCACGT TGATCTATGA CAACATGACC GCTGCGGTCC AAAAGATTCT CAGAGGCAAA AAGCGCATTG AACAGGACGG CTTTGCCAAA TTCAGAGCCC ACTATACCTT TGATGCTGTC TTTTGTAATC CTAGGGCAGC GCATGAAAAA GGCGGTGTTG AAGGCCTCGT GGGCTACGCC CGACGTAATT TTCTCACCCC GGTGCCTGAT GTTGATTCTC TCCAAGAACT CAATGAGTCA CTGTTGAGCC AGTGTCTCCT CTATAAAGAG CAGCATATCG TCTCCGGGCA GGAATATACC GTTGGTCAGC GTTTTGAGCA TGAAAAGCAC CGGCTCCTGG ATCTGCCTGC TCAGCCCTAC AGCAACACCA TTTCACAGTC GGGCAAAGTA AACCATTATG GCACAGTCAT ATCGGACAAA AACCACTACT CCGTGCCCTC CCGGTATGCG GGGCTGAAAG TCCACCTGAG CCTCGGCGCG CAAAAGGTCG AGGTATTTTA CGATGGACGC CGCATTGCCT GCCATGACCG CGTTTACGGG AACAACAAGT GGGTGCTTGA CCCTGATCAC TACCTGGATC TGTTGCAAAC GCGTCCCAGC GCCTTTAGCT CGGCCAAGCC CATCAAGCAG TGGCGTGCTG AGTGGCCGGC AAGCTTTGAA CGGCTCCTCC AGCGCTTACG GCAAGCACAG GGGATAGGCA AAGGCACCAA GGACTTTATC AGTGTGCTCA AGCTCTACCG CGAGCATGCA TCCGAGGACG TCGAGCGGGC TGTCCAGCGC GCTCTGGAGG CGGGCGTTAG CAGCGGCGAA GCCGTGAGGC ACCTTCTCCG GCCACAAATC CCTGAGCCTG TTAGCGGCCC CGTTCCAGGG TGGAGCAGCT TTGTCCCTGC GGATATCTCA GTGTATGGCG AGCTCGGAGG TGTATCATGA
|
Protein sequence | MLKVEQFEFI RTSYRVYGLS ISEIARKTGH SRNTIRKVLR NEHSGYAARK QQPMPALEGF AGAIDSWLEQ DKQRPPKQRH TARRIFRRLV HEHGFQGSEP AVRRYVRQAK TRIGLGAKGA FVPAEPDAGL EAEVDWGDFK AYIAGKLTPL KLFCMRSKYS STSFVRAYPV ERQQALIDAH MQAFAFFGGV FPTLIYDNMT AAVQKILRGK KRIEQDGFAK FRAHYTFDAV FCNPRAAHEK GGVEGLVGYA RRNFLTPVPD VDSLQELNES LLSQCLLYKE QHIVSGQEYT VGQRFEHEKH RLLDLPAQPY SNTISQSGKV NHYGTVISDK NHYSVPSRYA GLKVHLSLGA QKVEVFYDGR RIACHDRVYG NNKWVLDPDH YLDLLQTRPS AFSSAKPIKQ WRAEWPASFE RLLQRLRQAQ GIGKGTKDFI SVLKLYREHA SEDVERAVQR ALEAGVSSGE AVRHLLRPQI PEPVSGPVPG WSSFVPADIS VYGELGGVS
|
| |