Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1496 |
Symbol | |
ID | 8419325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1733291 |
End bp | 1734628 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645038070 |
Product | transposase IS4 family protein |
Protein accession | YP_003198360 |
Protein GI | 258405618 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000517789 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000823353 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAGAG GGTTTATTAA AGGGCATCGA GATCAACTCT ACCTGTTGCC ACCTTCAATT GATGACTGGA TATCAAAAAA CCACAGTGTC AGGTTGATCG ATTCTTGTGT AGAAAATATT GATTTATCAA TTTTTTATGA AAGCTACTCC CACGAGGGGA AGCCGCCTTA TGACCCTGCT ATGATGATTC GTATTCTTAT TTATGCATAT AGCAAAGGAA TACGCTCTTC TCGGAAAATA TCTGCTTTAT GCGAAGAAGA TATTGCTTTC CGGTGGCTTA CCGGAAATAT AATTCCTGAT CATTCTGCTA TTTGCCGCTT CCGCGCTAAG CATAAAGAAA ATTTTAAGCA GCTTTTTCGA GAAACAATCC GTTTGGCCGC TGAATCCGGT GCGTTAAAAA TAGGCAGTCT TTTTCTTGAT GGAACTAAGG TGAAAGGCTC GGCTTCCTTG GAAGCCAATC GTAATCTCGA GCATATTAAG CAAGACATTG AACGCATCGT GGACGAAGCT GAGGCAGTCG ATGCCAGTGA GGATAAGCAG CTCGGCGAAG ATAACCGGGA CGATGTTTTG CCCCCTGAGC TTGCTGATCC CAAATCCCGG TTGGAGCGAC TCAAGGCTGC CAAGGCCAGG CTGGAAGCTG AAAAAGAGGC TGCGGCGAAA GAGTCTCGAG ATGACGACGA CTCAAATGGT CCTGGAGCTG GCACCGGTGA TGAAAAAACG GCCACTGGCA ACAAAGAAAA AGCAAATATC ACCGATCCTG ACAGCAGAAT AATGAAAACA CGGAACGGCT GGGTGCAAGG GTATAATTGC CAAGGAGTTT CAGACGAAAA TCAGTTTATA GTCGCCAACG CAGTTACTCA AGACTGCAAT GACGCCCACC AACTCGAACC AATGCTTCAA GCGGCTCAAG ACAACTTGTC CAAGATAGAG ACAGGCCAGA ACACCGAAAC CTTTTCGGCA GATGCCGGTT ACTGGGCTGA GGGACTTGAT ATTTCAAAGA TCGAGAGCAA TGGCCCAGAG GTGATTGTGG CTACCCGCAA AGGCTGGAAG CAGCGAAAAC AAAACCGTGA AAAGTCCCCA CCTCGAGGGC GGATCCCCAA AGGGTTATCC CAGCGGGAGT TGATGGAACG AAAGCTACTG ACCCAAAGAG GCCAGCGGAT CTATGCCAAG CGCGGACAAA CGATAGAAGC TATTTTCGGT CAACTCAAGG AATGCCTTGG ATACAGGAAT TTTCTATTGC GTAGCCTCAA AAAAGTTCAG GGTGAATGGG ACCTCCAATG TGCAGTGAGC AATATGCTCA AGCTGTTTCG GTTGTCAGGG GCCACCACCA GTCAGTAG
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Protein sequence | MARGFIKGHR DQLYLLPPSI DDWISKNHSV RLIDSCVENI DLSIFYESYS HEGKPPYDPA MMIRILIYAY SKGIRSSRKI SALCEEDIAF RWLTGNIIPD HSAICRFRAK HKENFKQLFR ETIRLAAESG ALKIGSLFLD GTKVKGSASL EANRNLEHIK QDIERIVDEA EAVDASEDKQ LGEDNRDDVL PPELADPKSR LERLKAAKAR LEAEKEAAAK ESRDDDDSNG PGAGTGDEKT ATGNKEKANI TDPDSRIMKT RNGWVQGYNC QGVSDENQFI VANAVTQDCN DAHQLEPMLQ AAQDNLSKIE TGQNTETFSA DAGYWAEGLD ISKIESNGPE VIVATRKGWK QRKQNREKSP PRGRIPKGLS QRELMERKLL TQRGQRIYAK RGQTIEAIFG QLKECLGYRN FLLRSLKKVQ GEWDLQCAVS NMLKLFRLSG ATTSQ
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