| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1493 |
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| Symbol | |
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| ID | 8419322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1726392 |
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| End bp | 1729991 |
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| Gene Length | 3600 bp |
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| Protein Length | 1199 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038067 |
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| Product | SMC domain protein |
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| Protein accession | YP_003198357 |
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| Protein GI | 258405615 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.326232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000327105 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCTGC CTGACGAGTT TTTCGCCCTG GAGGAAATCA CCGCCCAGCG TTTGTTCCTG
GTCGGCTACC ACCTCTTCCC GGCCACGGAA ATGGTGCTGC ATCCGCGCAT GACCGTGCTC
TCCGGAAATA ATGCTGTCGG CAAGACGACC ATCCTCGACG CTTTGCAGAC CATTTTCGTC
TGTCATCTCA AACATATCCA TCTCAACGTC GCTTCAGGGC ACAGTACCCG CAACCTGACC
GGCCAATTGG GCGGTCCGGT GGCCTGGGCC TGCGTGGAGA TCACCGGTCA CGAGGTCGTC
CAGGGCATCG GCGTGCGGTT ACGCCAAAAA CCTGGCGGAG AGGGTGTGGA ACTCTCCCCT
TTTGTGCTCC ACCACCTCGC GCCTGGCCTG GAATTGTTCC TGGACCAGGA ATCCGGCTAC
ATCACTCCCG ATATGCAGCA CCTTGGCCAG CGTGTGCTCA AAACAGCTCC CACGCCAGCA
GCCCAGGTCC AGCCCTTCGA TTCCGTGGAC AACTACCACC GCTTCCTGCA CCGCGAAGGG
CTCTTTCCCA TCGATCTCAG CGGCTCTGGC AAGAGCCATT TCGCCGACCT CTGGCGCCAG
GTCAGCCAGC CACGGCTGGA TAAGTTACGG CAATTCCTGG AATACATGCT CTGCCCGCCA
AGCCAGACCA AAAAACTCGG CTTCGACACC GTGGACCGGC TCATCAAGGA CCGCCAGCGC
ATTGAACGGC TCTTACAACG GCTTGAACAT TTCCGGGCCC TGCGCCAGGA ACTTGAAGAC
CAGACCCAGC GCCTGGACCA GGCCCGGTTC ACCGCCCTGG CTCTCGGGGT CTCTCTGGCC
GACGCCCGCA TCCACACCAC CCGGCTCCGG CTACAGACCG CCAGAAACCG GGAACAGGAG
ATCGCCCAGG AATTGCACCG CCTGGACAGC GACATTGCCG CGCGGACCGA AGAGCTCCAG
ACCACCCGCC AGGAGCGCGA CAAATACCTC GGACAACAGA CTGACCTGAA CACCAAATAC
CGCCACTACA CCGAGTACCA AAAGGCCTTG CAGGCTGTGC CCCCCTTGCG CCAGCAACAA
ACCGAGATCG CCAGCCAATC TAGCGAGGCC GAGGAAAAAT TGCGTGGGGT GGAAACCGAA
TTGGAGACCG CGGCTGAACA GCTCCAGGCA TTGCAGCAGG ATATTGCCGT GGCCCGAGAG
CGGGAAAAGC AGCTGCGGCA AGAAGCCCAG GCGTGGCACG ACCTGCAGGT CCAGCTCCAA
AAATGGGAGG AGCAGTTCCA GCCCGCCATC GGCTCACGCC GGGAACTGAA CACCGTCTGG
AACCAGTTCC AGGACACCTG GAGTCAGTAC AAATCCCTGC CGAGCAAAAA ACGGGAACTC
GCCAGCCTGG AAAAACGCAA AAACGAGCAC CAACGCGCCC TGCAAACGGC CCAGACGCTT
CGCAGCACAG CCCCGGAACT CGATGACACG GAAATGGACC ACTCCCGGCT CGAACAACGG
CTCTCCGAAT GGAAAGATGA GCATTACGCC CTGTGGGAAC GCCAACACGT GGACCGGGAG
CGGAAAACCG AACTCCAGAC CCAATGGGAG CAGCTGGCCA AAGGACGTCC GCCCCTGCCT
GAGAGTGCCG CGCGCCTGGT GGAGGACGGG CTGGCCGTCC CCTTTGCCAA CCGCTTCGAA
CACATGGCCC TGGAAGAGGC CGCCGACTGG CAACACCGAC TCGGCCCCTT GGCCCAGGCC
CTGGAACCCG CCTCCGGCAC GGCTCCCACA GATCTGGCCC GCGGCGACAA ACCGTTTTTT
CTCATTCCGG AGGCTGGCGC TCCGGATGCC GCGCAATGGG AATGGCTGGC CCAAACAGAT
GAGGGGGTGC TTGCCGGACG CGCCGGTCTG GCCTGGTATA CCCCGCAAGG TCCGGTCTGG
CTCGGGGCGC AGGCCAGGGC GCAGCAGATG CAGAGCTTGC AGGAGGCGCT GCAACGCTTT
GAAACCCATC TGGCCCAACA AGAACAACAA ATCCAGGCCT TGCAGACCAA ACAGAATCTG
GCTGCGGATC TGCTCCACCG CTTCGCCGCT TACACCGATA CCGAAAGTCC GGGCGCCCAC
TCGCGTCTGG CCCAAGAAGT CGCCGAACTC GAAGCCCAGG GTCCCTCACT CAAACAGCAG
CAACGGCTTT TGCAGACCCT GCTGCACCAG GCCCACGCCT TTGATTTTCA GCACGCTCCG
GGAGAACTTG ATAAGGTCAG CACCAGGCGC CAGCAGGCCG AGTCCGAAAA ACAGACGCTT
CAGACCAGAC AGCGCGAGCT CACGGCCACT CGGAAAACCC TGCAGGAAAC CCTGACCCGG
CTCCAGGAAC AGCAACACGA CCTCCAACGC CAGGAAAACG GCTGGGAATC CAAATGCGAG
GCCCTGCGCC AGGAAGAGCC CCTGGATGTC CTCGAGGGCC GGATGGATTT CAGCCGTGCC
GAAGCCCTGC AAGACCACAT TCAAAGCCTG GAACAAAAGG CGCAGCACCT GGAAACCAAG
CTGGATGGGG ACAAAGACAC CCGTGGCGGA CTCAAACGCG AAGCCGCAGA GCTCAGCCAA
ACCGCGGCCA CCGCATCGCG GGACCTGGAA AACGCCCAAG CGGAAGCCGC TCAGGCCAAA
GAGGCCTTTA TCGCCCAGTA TCCGGACCAC GATCTGCCCA ACTTGGAGGG CCAGAACGAA
AACGACCGAC TCAAGGCGGC CGCGGCCTGG GAACAGCTCC GGCACGCTCT CACCCGACGT
TTGCAGGACC TCGCCCGGCA GTACGAACTC ACCCTGCCCC AGGACCAGGA ACCCGACCAA
TGGACAGCCT ATCTCCTGGA AAATCTCATG CCTGTCGACA TCGACCTCAC CAACCAGGAG
GACAAACTCA AGGAACTGCG CGGCGAACTC AAAGGGGTCG AAGAACAAAT CCGAACCTAT
GTCGAACAGA TTCGCAAACA TGTAGACCAG GAAATCGGAT ATCTCGACCG CCGACTGCAT
CGGGTCAACG CCATTTTGGA GAGCATGCAC TTCGGCAAGA TCGCCCGCAT CCGTCTCAAG
CGTCAGAACC TGCCAGCCTA TGAAGGGCTC AAGAACCTGC GCGGTGCCCA ACTCAGCCTG
CTGCAAATGG GCCAGGAGAT CTCCCTGCAG GATTTTGTCC AGCAGATCCG GCAGACCATT
TACCGCCACG GCAAGACCAG CCTGAGTGAG GACCAGATCC TGGATTATCG CAGCTATATC
CGACTGACCT GGGATATCGA GGACGAAGAG GGCAATCGTC GCGACAGCAG TTTTTCCGGA
GGCGAAGGAC TGGGCATCAA TCTAGCCATC TGCCTCAGTC TGTTGTTCTA TTTTGGCCAG
GAGCAGGGGG CCAGCCGGGG GCAGGGCGTC TTGCTCATGG CCCTTGACGA GGCCGAACGC
CTGGACAATC AGGCCATGGG CACCATCCGC CGCTTGCTGG ACCAGGTGGC CTGCCAATTG
GTGGTCGCGT TGCCGCGGAC CATCGAAGTC CCCTCTTCAG TCTGCCACAT GCTCACGCCC
CTGCCCCAAG GTGTGACCCA TATTTCAGTC TACCACGCTG AACAGGAGCA TGGAGCATGA
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| Protein sequence | MPLPDEFFAL EEITAQRLFL VGYHLFPATE MVLHPRMTVL SGNNAVGKTT ILDALQTIFV
CHLKHIHLNV ASGHSTRNLT GQLGGPVAWA CVEITGHEVV QGIGVRLRQK PGGEGVELSP
FVLHHLAPGL ELFLDQESGY ITPDMQHLGQ RVLKTAPTPA AQVQPFDSVD NYHRFLHREG
LFPIDLSGSG KSHFADLWRQ VSQPRLDKLR QFLEYMLCPP SQTKKLGFDT VDRLIKDRQR
IERLLQRLEH FRALRQELED QTQRLDQARF TALALGVSLA DARIHTTRLR LQTARNREQE
IAQELHRLDS DIAARTEELQ TTRQERDKYL GQQTDLNTKY RHYTEYQKAL QAVPPLRQQQ
TEIASQSSEA EEKLRGVETE LETAAEQLQA LQQDIAVARE REKQLRQEAQ AWHDLQVQLQ
KWEEQFQPAI GSRRELNTVW NQFQDTWSQY KSLPSKKREL ASLEKRKNEH QRALQTAQTL
RSTAPELDDT EMDHSRLEQR LSEWKDEHYA LWERQHVDRE RKTELQTQWE QLAKGRPPLP
ESAARLVEDG LAVPFANRFE HMALEEAADW QHRLGPLAQA LEPASGTAPT DLARGDKPFF
LIPEAGAPDA AQWEWLAQTD EGVLAGRAGL AWYTPQGPVW LGAQARAQQM QSLQEALQRF
ETHLAQQEQQ IQALQTKQNL AADLLHRFAA YTDTESPGAH SRLAQEVAEL EAQGPSLKQQ
QRLLQTLLHQ AHAFDFQHAP GELDKVSTRR QQAESEKQTL QTRQRELTAT RKTLQETLTR
LQEQQHDLQR QENGWESKCE ALRQEEPLDV LEGRMDFSRA EALQDHIQSL EQKAQHLETK
LDGDKDTRGG LKREAAELSQ TAATASRDLE NAQAEAAQAK EAFIAQYPDH DLPNLEGQNE
NDRLKAAAAW EQLRHALTRR LQDLARQYEL TLPQDQEPDQ WTAYLLENLM PVDIDLTNQE
DKLKELRGEL KGVEEQIRTY VEQIRKHVDQ EIGYLDRRLH RVNAILESMH FGKIARIRLK
RQNLPAYEGL KNLRGAQLSL LQMGQEISLQ DFVQQIRQTI YRHGKTSLSE DQILDYRSYI
RLTWDIEDEE GNRRDSSFSG GEGLGINLAI CLSLLFYFGQ EQGASRGQGV LLMALDEAER
LDNQAMGTIR RLLDQVACQL VVALPRTIEV PSSVCHMLTP LPQGVTHISV YHAEQEHGA
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