Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1490 |
Symbol | |
ID | 8419319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1722136 |
End bp | 1723743 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645038064 |
Product | peptide chain release factor 3 |
Protein accession | YP_003198354 |
Protein GI | 258405612 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000251643 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000120572 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGATT CCCATTTTGC ACGACAACTG CAGCGCGAAG TCCGGCAGCG GCGGACCTTC GGCATTATCA GCCACCCGGA CGCCGGGAAG ACCACGTTGA CCGAAAAGTT CCTCCTCTTT GGCGGAGCCA TTCAGCAGGC TGGCGCGGTC AAGGCCAAGA AGGCCACCCG TCACGCCCGG TCGGACTGGA TGAAGGTCGA GCAGGACCGC GGTATTTCCG TGACCTCATC GGTCATGAAG TTCGAATACG GTGATTGCGA ACTCAATCTC CTCGACACCC CCGGCCACCA AGACTTTTCC GAGGACACCT ACAGGGTGCT GACCGCTGTG GACTCAGCCT TGATGGTCAT TGACAGCGTC AAGGGCGTCG AGAGCCAGAC CGAAAAGCTG ATGCAGGTCT GCCGCATGCG GTCCATTCCG ATCATGACGT TTATCAACAA GCTCGACCGC GACGGCCGCG AACCGCTGGA ACTTCTCGAC GAAATCGAAG ACAAACTCGG CATCCAGGCC GTGCCCATGA CGTGGCCCAT TGGCATGGGC AAGCGTTTTC AGGGGGTCTA CGATCTCATC AACGGCGAGT TGCGGTTTTT TGAGACCGCG GAGAACAAAG GCGCCCGCCC GAGGGAGGCC ACGGTGGTCA AGGATCTCGA GAGCGAGGAG CTTGACAGAC TCCTTGGAGA GACCGCCGCC AATGAACTCC GGGAAGATGT CGAACTTCTG AGCGGCGCCG GGTATCCCTT TGACCACGAG GCCTACTTGG CCGGAAAACA GACCCCGGTC TTTTTCGGCA GCGCGGTCAA CAACTTCGGG GTCCAGGAAC TGCTGGACAA TTTTGTTCGC TTGGCGCCGG CGCCCAAAGC GCGGGAGGCC GAGACCCGAA TGGTTGCCCC TGAAGAGCCG GAATTCTCTG GTGTGGTCTT TAAGATCCAG GCCAATATGG ATCCCGACCA TCGAGACCGG ATCGCGTTCA TGCGTATCTG CTCCGGGAAA TTCGAACGCG GTATGCGGGT GCGGCACCAC CGGCTGAAAA AGAATATGCA GCTCGGCAAC GCGATCATCT TCATGGCTCG GGACCGGGCC GGAGCCGAGG AGGCGTGGCC CGGGGACATT GTCGGACTTC CCAACCACGG CACGCTCAAG ATCGGCGACA CCCTGACGAG CAAGGAAGAG CTGAAATTTC TGGGTATCCC GAATTTTGCC CCGGAGTTTT TCCAGCGGGT TATCCTCAAG AACCCCCTGA AGTCCAAGCA GTTGGAAAAA GGGCTGGCCC AGCTGGCTGA AGAGGGGGCG ATCCAGTTTT TCCGGCCCAT CACCGGGCGG GAGTTTATTC TTGGGGCCAT TGGCGCCCTG CAGTTCGATA TCACCGCCGG GCGGCTGAAA ACCGAGTACG GGGTCGAGGC GACCTACGAG CCGGTCCAGA TCTACGCCGT GCGCTGGGTG GAATCGGAAA ACAAGAAGCA ACTCCAGGAA GTGCGCAAGA AGTACCACAA TTCTCTGGTG GAAGACGCCC AGGGCGCACC GGCGCTGTTT TTTCCCACCC GTTGGCGGCT GGAAAAAGCT GAGGAAGATT GGCCTGAGGT GCGCTTTACC CATGTGAAGG AGCATTGA
|
Protein sequence | MSDSHFARQL QREVRQRRTF GIISHPDAGK TTLTEKFLLF GGAIQQAGAV KAKKATRHAR SDWMKVEQDR GISVTSSVMK FEYGDCELNL LDTPGHQDFS EDTYRVLTAV DSALMVIDSV KGVESQTEKL MQVCRMRSIP IMTFINKLDR DGREPLELLD EIEDKLGIQA VPMTWPIGMG KRFQGVYDLI NGELRFFETA ENKGARPREA TVVKDLESEE LDRLLGETAA NELREDVELL SGAGYPFDHE AYLAGKQTPV FFGSAVNNFG VQELLDNFVR LAPAPKAREA ETRMVAPEEP EFSGVVFKIQ ANMDPDHRDR IAFMRICSGK FERGMRVRHH RLKKNMQLGN AIIFMARDRA GAEEAWPGDI VGLPNHGTLK IGDTLTSKEE LKFLGIPNFA PEFFQRVILK NPLKSKQLEK GLAQLAEEGA IQFFRPITGR EFILGAIGAL QFDITAGRLK TEYGVEATYE PVQIYAVRWV ESENKKQLQE VRKKYHNSLV EDAQGAPALF FPTRWRLEKA EEDWPEVRFT HVKEH
|
| |