| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1489 |
|---|
| Symbol | |
|---|
| ID | 8419318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1721209 |
|---|
| End bp | 1721469 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645038063 |
|---|
| Product | RNP-1 like RNA-binding protein |
|---|
| Protein accession | YP_003198353 |
|---|
| Protein GI | 258405611 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000319103 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000203081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGA ACATCTATGT CGGCAATCTG CCCTTTTCCG CCACCGAAGA CGAAGTCCGC
TCTGCTTTCG GCGCCTACGG TGAAGTAACT TCCGTAAAAT TGATCGAGGA CCGTGAGACC
GGTCGCCCCC GTGGCTTCGG TTTCGTAGAG ATGAGCGATG GTGGCGAGCA GGCCATTGAA
AACCTTGATG GCCAGGATTT TGGCGGGCGG ACATTGAAAG TCAATGAAGC CCGGCCCCGT
CCCCAGCGTC CCCGCTGGTA G
|
|---|
| Protein sequence | MSKNIYVGNL PFSATEDEVR SAFGAYGEVT SVKLIEDRET GRPRGFGFVE MSDGGEQAIE
NLDGQDFGGR TLKVNEARPR PQRPRW
|
|---|
| |