| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1485 |
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| Symbol | |
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| ID | 8419314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1715153 |
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| End bp | 1716265 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038059 |
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| Product | alanine dehydrogenase |
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| Protein accession | YP_003198349 |
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| Protein GI | 258405607 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.775902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000116767 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTATTG GTGTGCTCAA AGAGATCAAG GTCGAAGAAA ACCGTGTGTG CATGACTCCG
GCCGGGGTCG AAGTCATGAA GGCCAACGGC CATACGGTGC TGGTGGAAAA AAATGCCGGC
GTGGGCAGTG GCTTTTCCGA TGACGACTAT ATTACTGCTG GTGCGGAGAT CATTGATACC
CCGAAAGAAA TTTTTGACCA GTGCGATATG GTCATGCACG TCAAGGAACC TCAGCCCTCG
GAATACGAAC TGATCCGGGA AAACCAGATC GTTTTCACCT ACTTTCACTT TGCCGCTGAT
GAAGAATTGA CTCGGGCGCT GATGAAGACC AATTCCATCG CCATTGCTTA CGAGACAGTT
GTCGGCACCC ACAATGACCT GCCTCTGCTG ACTCCAATGA GCGAAGTGGC CGGCCGTATG
GCGACGCAGG AAGCCGCCAA GTTCTGCGAA CGGTCCATGG GCGGACTTGG GATCCTCTTC
GGCGGCGTGA CTGGCGTGGC TCCGGCCAAG GTGCTGGTTA TCGGCGGCGG GATTGTCGGC
ACCAATGCCG CGCTGATGGC CGCCGGCCTG GGTGCGGATG TGACCATCCT CGACCTCGAT
CTGGATCGTC TGCGCTACCT CTCGGAGATC ATGCCCGCCA ATTGCCGGCC GCTGAAATCT
TCCCCGGCCC TGCTGCGTGA ACTGGCGCAG GATGCCGATG CTGTTATCGG CGCGGTTCTG
GTCACCGGCG CCAAGGCTCC GAAACTCATC ACCCGCGAGA TGCTCAAGAG CATGAAGAAA
GGGTCGGTCC TCGTGGACGT TGCCATTGAC CAGGGCGGTT GCTTCGAAAC CTCCCGTCCC
ACGACCCACA CCGACCCGGT CTTCGAGGTC GAAGGGGTTA TCCATTATTG CGTGGCCAAT
ATGCCCGGTG CCGTCCCGGT TACTTCGACG ATGGCCCTGA CCAATGCCAC CCTGCCTTAT
GCCGTGCATC TGGCCAACAA GGGCTGGCGC CAAGCCTGCA AAGATGTGTT CGGCCTGAAG
GAAGGCGTCA ACATGGTCAA CGGCAAAATT ACCTACAAAG GGGTTGCCGA CGCCTTCGGT
CTGGATTATA CGCCAATCGA CGAGGTCCTG TAG
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| Protein sequence | MRIGVLKEIK VEENRVCMTP AGVEVMKANG HTVLVEKNAG VGSGFSDDDY ITAGAEIIDT
PKEIFDQCDM VMHVKEPQPS EYELIRENQI VFTYFHFAAD EELTRALMKT NSIAIAYETV
VGTHNDLPLL TPMSEVAGRM ATQEAAKFCE RSMGGLGILF GGVTGVAPAK VLVIGGGIVG
TNAALMAAGL GADVTILDLD LDRLRYLSEI MPANCRPLKS SPALLRELAQ DADAVIGAVL
VTGAKAPKLI TREMLKSMKK GSVLVDVAID QGGCFETSRP TTHTDPVFEV EGVIHYCVAN
MPGAVPVTST MALTNATLPY AVHLANKGWR QACKDVFGLK EGVNMVNGKI TYKGVADAFG
LDYTPIDEVL
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