Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1469 |
Symbol | |
ID | 8419298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1698229 |
End bp | 1698552 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645038044 |
Product | branched-chain amino acid transport |
Protein accession | YP_003198334 |
Protein GI | 258405592 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.656646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0172198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCAGC ACGCGGTCTT CCTGATTATT CTGGGCATGA TGGCGGTGAC CTATCTGCCC CGGGCCCTGC CGATGACGGT GTTGTCCTCG TTCAGTCTGC CCGATTGGGT GGTTCGCTGG CTCGGATGCG TCCCCGCGGC GGTCCTGGCC GCCTTGTTGT TCCCGTCGCT TTTGCTCCGC GATGGCGCTG TCAGCCTGGG GCTGGAGAAT ATTTTTTTGT GGGCCGCTGT GCCCACGTTT GTGGTCGCCA AATGGCGGGG GAGCTTTGTC GGGGCTATTG TGACCGGGAT GGGCGTGGTA GCCCTGGCCC GGCTGGCAGT CTGA
|
Protein sequence | MDQHAVFLII LGMMAVTYLP RALPMTVLSS FSLPDWVVRW LGCVPAAVLA ALLFPSLLLR DGAVSLGLEN IFLWAAVPTF VVAKWRGSFV GAIVTGMGVV ALARLAV
|
| |