| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1433 |
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| Symbol | |
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| ID | 8419262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1666037 |
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| End bp | 1667200 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038008 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003198298 |
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| Protein GI | 258405556 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.58748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.153521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGACA GAAACCACCC CGGTGCCGGG GTCGACTACG AGGAACTCTA CGAGGCCTTT
CTTGACCTGG AACGGGTCCG CCGGCGTGAG GCGGAGTCGC GGCAAGTAGC CGAAATTTTG
CTTGATGGAC TGCGAGATCT GACCAGTGCC ACCACGGCCC AGGATGGTCT GGACAGCGTG
CTGAGCATTT TACGTCAGGC CGGCGGCTTT GCGGCGGTGT TTGTTCTGGT TGAAGAAGCC
CAAGACGTCT TCAAGGTACT CTCCAGTACG GACAGTGTTT TTGAGGGTAC TGTCTGGCGC
AAAAAGGAGG TGTTCAGCCG CCTGCTGGAG CGGATGAAGC CGCTGGTCGT CTATGACACG
CGCTCGGTCC CGGAGTGGCA GCGCCATCCA GGTGTGGTCC GGGAAAGGGC CAAGGCGGCC
GTGCACGCCC CGTTCGCATT TGGCCGGGTG CGGGCCGTGT TGACCTGTGT TCGGGAAGAA
AACGGAGCCT GTGCCCAGAC GGATGCCAAG TTGCTCTACC GGCTGATGCC CCTTTTAGAG
CAGACGCTTT TGACCATGCG GCGCATGGAC GAGCTGCGTC TGGCTAAAGC GGCCTTGCAT
GCCAAATCCT GCGCGCTGGA ATCCACGGTT CAGGAGAACC GGCTCCTGGC GCGAACGGAT
TTTTTGACCG ACTTGCCCAA CCGGCGGGGC TTTTTCGAGG CCGGAGCCAA GGAGATCCGT
CGGGCACACC GGTACGGCCG GCCCCTCTCG GTTTTGTTGC TCGATCTCGA CCACTTCAAA
AAGGTCAACG ATGTCTACGG TCATGACGTC GGGGACCATG TCCTGGCCCA GTTTGGACAA
AAATGCCGCG GCAGGCTCCG TGAGCACGAT CTTATGGCCC GCCTCGGCGG CGAGGAATTC
GCCGTGCTGT TACCGGAAAC CCCGGTTGCC GAAGCGAGCC AGGTCGCTGA AGGGTTGCGA
CGGTTTGTTG AAGGCTCCAG CCTTGCCGGG GTGTTGGAAG CCGGAGAGGT TACCGTGAGT
ATCGGGGTCT GCGAACTCGC GCCCCAGGAA GATTCCTTGT CCGAAGTGTT GAAACGGGTG
GACACGGCTT TGTATATGGC CAAACAGGCC GGGCGGAACC TGGTCCGGCC CGAGCAAGCG
TTTCCGGCCT CCCGGGCGAG TTGA
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| Protein sequence | MTDRNHPGAG VDYEELYEAF LDLERVRRRE AESRQVAEIL LDGLRDLTSA TTAQDGLDSV
LSILRQAGGF AAVFVLVEEA QDVFKVLSST DSVFEGTVWR KKEVFSRLLE RMKPLVVYDT
RSVPEWQRHP GVVRERAKAA VHAPFAFGRV RAVLTCVREE NGACAQTDAK LLYRLMPLLE
QTLLTMRRMD ELRLAKAALH AKSCALESTV QENRLLARTD FLTDLPNRRG FFEAGAKEIR
RAHRYGRPLS VLLLDLDHFK KVNDVYGHDV GDHVLAQFGQ KCRGRLREHD LMARLGGEEF
AVLLPETPVA EASQVAEGLR RFVEGSSLAG VLEAGEVTVS IGVCELAPQE DSLSEVLKRV
DTALYMAKQA GRNLVRPEQA FPASRAS
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