Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1413 |
Symbol | |
ID | 8419242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1643789 |
End bp | 1644877 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037988 |
Product | putative glycerol-3-phosphate acyltransferase PlsX |
Protein accession | YP_003198278 |
Protein GI | 258405536 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.942909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGC CTAGCCGGCC CTGCATAGCC GTCGACGCCA TGGGGGGCGA CTTCGGCCCC CAGGTGGTCG TTCCCGGCGC TTTGAATGCC GCGAAAGCCA ATGCGCTGTC CTTGGTCTTT GTGGGACGGG AGGAAGAGAT CCGTCCCCAC CTGGACCAAG CCGACACCAC TGGCGTGGAG GTGGATGTTG TCGACGCACG GGAAGTGGTT GCCATGTCGG ACAAGCCCTC CCAATTGCGC CGCAAGCAGG ACACGTCCAT CCAGAAAGCG TTTTTGCAGG TCAAAAAAGG GCGGGCCGAC GGGGTTGTCA GCGCTGGCAA CTCAGGGGCC AGTCTTGCTT GCGGGATGTT TACCCTGGGC CGGATCAAAG GCATTGAACG CCCAGCGCTG GCGTCCATCC TGCCGACAGA GAAAAACCCG CTGGTACTGA TCGACGTTGG CGCCAACGTG GACTGCAAAG CGCGGCACCT CTTTCAATTC GGGCTCATGG CCGATGTCCT GGCCAAGGAT GTCCTGCAGA TTGAAAGCCC CCGGGTGGGG ATTTTGAGCA TTGGCGAGGA GGAAGGAAAA GGCAACGCCC TGGTGCGCGA TGCCTACACC ATGCTCAGCC GGTCTTCCCT GAATTTTGTC GGCAATATTG AAGGCCGGGA CATTTTCGGT GGAGACATCG ATGTGGCCGT GTGCGACGGC TTTGTGGGCA ATGTGGCCCT GAAAATCAGC GAAGGGCTGG CCCACTCGTT GTCGCGCATT CTCAAACGGG AATTGACCAC GGGCGTCATG GCCAAGTTGG GATGCCTCCT GGCCAGAGAC GGCTTCCGCC GATTCGCTAA ACGGGTCGAC TATGCCGAAT ACGGCGGTGC CCCGCTACTT GGGCTCAACG GGATCGCCCT TGTTTGCCAC GGGGCGTCGA ACGCCAAGTC CATTTCCAGC GCCGTAGCCA TGGCTGGCAC GTTTGTCGAC AACAATGCCA ATGAACACCT AGTCCAGGGA TTGACCAGAA ACAAGGAACT TTCCCTCTAT GGGCGAGGCA ATGGTGAGGC TTCTGAAGCC GCTGCGTCCC AGGAGTTGCC CAAGGCCTCC TCTTCGTAG
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Protein sequence | MNKPSRPCIA VDAMGGDFGP QVVVPGALNA AKANALSLVF VGREEEIRPH LDQADTTGVE VDVVDAREVV AMSDKPSQLR RKQDTSIQKA FLQVKKGRAD GVVSAGNSGA SLACGMFTLG RIKGIERPAL ASILPTEKNP LVLIDVGANV DCKARHLFQF GLMADVLAKD VLQIESPRVG ILSIGEEEGK GNALVRDAYT MLSRSSLNFV GNIEGRDIFG GDIDVAVCDG FVGNVALKIS EGLAHSLSRI LKRELTTGVM AKLGCLLARD GFRRFAKRVD YAEYGGAPLL GLNGIALVCH GASNAKSISS AVAMAGTFVD NNANEHLVQG LTRNKELSLY GRGNGEASEA AASQELPKAS SS
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