| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1405 |
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| Symbol | |
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| ID | 8419234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1638879 |
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| End bp | 1639526 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037980 |
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| Product | thymidylate kinase |
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| Protein accession | YP_003198270 |
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| Protein GI | 258405528 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.201868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCATTA CCTTTGAAGG AATAGAAGGC TGCGGCAAAT CCACGCAATC GACCCTTCTC
GCCCAATGGC TCAAGAACCA TGGTTGGGAG GTGCAGACCA CCCGGGAACC CGGGGGCAGT
CGCCTTGGCC AGAATCTGCG CTCCATTTTG TTGAGTATGG AAAGCAGGGA CCTGACCGGC
GAAAGCGAAC TCTTTCTCTA TCTTGCCGAC CGCGCCCAGC ATGTGCACCA GACGATCAAG
CCCGCCCTGG ACAAAGGCGC TGTGGTTCTC TCGGACCGTT TTGCGGACTC CACAGTGGTC
TATCAGGGCT ACGGCCGGGG ACTGGACCCC AATCTCCTGC ACACCCTCAA CGACGTCGCG
GTCCAGGGAG TCTGGCCGGA TCTGACCCTG CTTTTCGACC TGCCGGTGGA GTTGGGGCTG
AAACGGGCCA TGGCCCGCAA TTTTCAGGAC AACAAGACCG AACAGGAAGG GCGTTTCGAA
GCTGAAAGTC TGGCCTTCCA TTCCCGGGTC CGTGAAGGGT ACCTGACCTG GGCGGCCCTG
AACAAAAACC GCTTCCAGGT CGTTGACGCC GAGCCGGATC CAGAGACCAT TTTCAACGAG
GTCCAGCGGA TACTGCGCCA CCGGTTTCCA AAATGGTTTC CCGAGTAA
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| Protein sequence | MFITFEGIEG CGKSTQSTLL AQWLKNHGWE VQTTREPGGS RLGQNLRSIL LSMESRDLTG
ESELFLYLAD RAQHVHQTIK PALDKGAVVL SDRFADSTVV YQGYGRGLDP NLLHTLNDVA
VQGVWPDLTL LFDLPVELGL KRAMARNFQD NKTEQEGRFE AESLAFHSRV REGYLTWAAL
NKNRFQVVDA EPDPETIFNE VQRILRHRFP KWFPE
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