| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1359 |
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| Symbol | |
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| ID | 8419188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1586768 |
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| End bp | 1587694 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037935 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003198225 |
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| Protein GI | 258405483 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0236512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.473156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACGA AGAGTACTTG GCAACGGTTT AAGGATTCCT ACATCCTGTA CAGTTTTTTT
CGGGATCCGG TGGCGATTAT CAGTTGTGTC ATTTTGGTGA CACTGACAAT CGTCGCTTTT
ACTGCCCCGG TTTCCGCCCC GTATGATCCG TATGATACGT CGAGCATAAG CATCCTCGAT
GCCGAATTGC CGCCGGTATG GATGGACGGC GGCGATACCA ATTTCCTTCT GGGGACCGAC
GATCAAGGCC GCGATCTGCT TTCAACCATG ATCTACGGCA TGCGCGTCTC GATTATCATC
GGTCTGTGCG CGGTGGCCCT CCAGGCCGTG CTCGGGGTCA TAATTGGACT TGTGGCCGGC
TATTTCGGGG GGAAGCTGGA TTCGTTTTTT ATGCGCTTGG CTGACGTGCA ACTCTCGTTT
TCCTACCTCA TGGTCGCTAT TTTCGTCAGT GCGGTCCTGC AGGCCGCCAT CGGAGTGGGG
CGGTTTGAAG AGATAGCGGT CCCGTTTTTG ATTGTTGTCA TCGGGCTGGC CCAATGGCCG
CAATACGCCC GGACCGTTCG GGCCTCGGTG CTGGCGGAAA AGAAAAAAGA ATATGTCGAG
GCCTCCCGGG TCATCGGGTT GCGCTCCAAC AGGATCATGT GGCGCCATAT TCTGCCCAAC
TGTCTTTCGC CGATCTTTGT CTTGTCCACC ATTCAAGTCG CGAATGCGAT CATGAGCGAA
GCCGCACTCT CGTTTCTCGG GTTGGGCATG CCGCCGCATA AACCGTCGCT GGGCTCGTTG
ATCAATATTG GCTTTGAATA CATGCTCAGC GGATCGTGGT GGATCACCGC CTTTCCCGGA
TTCTTGCTGG TGGTTTTGAT TCTGGTCATC AACCTGCTCG GTGACTGGTT GCGCGATGTC
CTCAACCCCA AGCTGTATAA GGGATAG
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| Protein sequence | MKTKSTWQRF KDSYILYSFF RDPVAIISCV ILVTLTIVAF TAPVSAPYDP YDTSSISILD
AELPPVWMDG GDTNFLLGTD DQGRDLLSTM IYGMRVSIII GLCAVALQAV LGVIIGLVAG
YFGGKLDSFF MRLADVQLSF SYLMVAIFVS AVLQAAIGVG RFEEIAVPFL IVVIGLAQWP
QYARTVRASV LAEKKKEYVE ASRVIGLRSN RIMWRHILPN CLSPIFVLST IQVANAIMSE
AALSFLGLGM PPHKPSLGSL INIGFEYMLS GSWWITAFPG FLLVVLILVI NLLGDWLRDV
LNPKLYKG
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