| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1347 |
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| Symbol | |
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| ID | 8419176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1575116 |
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| End bp | 1576036 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037923 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003198213 |
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| Protein GI | 258405471 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.816733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.74121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACCTG CTTCTCCTGA TACGCGATCC ACACACGCCT GGAAAGACGC CTATGTCGAA
CACCTGCTGG TGATCAAAGG TTTGGCGGAT CCCAGTGTGG CTGCTTATGT CCAGGATATT
GAGATGTTTA TCCAATTTCT GGAACAGAAA GGTGAGAGTG TGGCCACCTG CGACGCTAAC
GCCTTTTTGT ATTTTTTGCT CCACCTCAAG TCCCGGGGCT TGACCAACCG GACCATCGCC
CGCCACCTTT CCAGTCTGCG GGGGTTTTTT CAATTTTTGC AGACCTCCAA CCGCCGGGTC
GACGATCCCA CGGCCCATGT TGACGGGCCC AAGTTGACGC GGCAATTGCC GGAATTCCTC
GATGTGCAGG AAATGCAGGG CCTGCTCGCT CAGCCCGACA CCGGCACCAA ACTCGGATTC
CGGGACCGGA CCATCCTGGA ACTCTTGTAC GCGGCCGGCT TGCGGGTCTC GGAGGTCATC
CGCCTCCAGG CCCTGGACAT CGATTCCCAA ACCGGGGTTG TGCGTGTCTG GGGCAAGGGA
GCCAAAGAGC GGCTCGTTCC TTTGCACCCC GCAGCACTCG ACTATGTCCG CACCTATGTT
CAGGCGTGGC GGCCCCAATT CGCCCCGCAG CACAAGGTTT TGTTCCTCAA CCGCTCCGGG
CGTTGCCTCT CCCGGCAGGC AGTGTGGAAA AACGTCAAGC GCTACGCTGT GGCCGCAGGC
ATTCGGCGCT CGATTTCGCC GCACACCATC CGCCATTCCT TCGCCACCCA TCTTCTCGAG
GGCGGCGCTG ACTTGCGGAC GGTGCAATTG CTGTTGGGCC ATGCCGATAT CAGCGCCACT
GAGATCTACA CCCATGTTCA AGCCGGCCGC CTGCGTGCGG CCCACCAGGA TCACCATCCT
CGAACCCGGA TCAAGCCATG A
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| Protein sequence | MSPASPDTRS THAWKDAYVE HLLVIKGLAD PSVAAYVQDI EMFIQFLEQK GESVATCDAN
AFLYFLLHLK SRGLTNRTIA RHLSSLRGFF QFLQTSNRRV DDPTAHVDGP KLTRQLPEFL
DVQEMQGLLA QPDTGTKLGF RDRTILELLY AAGLRVSEVI RLQALDIDSQ TGVVRVWGKG
AKERLVPLHP AALDYVRTYV QAWRPQFAPQ HKVLFLNRSG RCLSRQAVWK NVKRYAVAAG
IRRSISPHTI RHSFATHLLE GGADLRTVQL LLGHADISAT EIYTHVQAGR LRAAHQDHHP
RTRIKP
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