Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1305 |
Symbol | |
ID | 8419134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1528136 |
End bp | 1529194 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645037881 |
Product | hypothetical protein |
Protein accession | YP_003198171 |
Protein GI | 258405429 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.122473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0347421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCG ATATCCCGTT TCTCCCCGAT CCCGAGTATC TTCAGGCCCT GACCCGCTTC GAACCAGACC TGGCCACCCT CCATTTCAGC CTGCATGCTC CCGGCATCCC TGACGCCCGG GCGCGACTCC GCGAGGTCGA AACCGACCGG CTGATCGATC TCTTGCGGCT GGGCCCGGGC TGTGACCGCC TTGCGCTCCT GAACAGCCGC TTGCACACCC CTGCTTTTCT GCGTGAGCCA GCGGCAAGGC GCCCGCTGCT CAATGCCCTG GAGCGGCTGC TTGCGGCTGA CGTCTGCCAG GGGATCGTCG TGGCCGATCC GTACCTGCTC AATGTCCTGG GCGACGATTC GCCCCATCTG GCCGGGGCGC TTCAGGCAGT GCCCAGCGTC AACGCTCGGC TGGCATCGGT CCACGCGATC CGGGCCTGGC GCACTGTCAT CGAGGAGGCC GGGTTTTTGC CCCCGGCCCG GCTGGTTCTG GATCGTGAAC TCAACCGGGA TCCAGGGCAG TTGGAAACCT TGAGCGCTGC CTGTCGCCGG TTCTGGCCGG ATCAAGAGGT GTTTCTGCTC GCCAATGAGG GATGTCTTCC CCATTGCCCC TACAAGCCGG CCCACGATGG CCAGATCGCT CTTGCGGCTT GCGACTTGAC GGCTGAGGCC ACATTCGAAC TCAATGCCAC GGCGGGATGT GTCCGGCATT TGTTGCGCGA TCCCGCAGCT GTGTTGCGCT CGCCGTTTAT CCGGCCCGAG GACGGCGAAC GCCTTGCCGG GATGGTCGAC GGGCTCAAGC TGTGCGGCCG GAATATGGGG AGTCGTTTCT GCCTGCGCGT GCTCAGGGCC TATGTACAAG GCCGATTTTC AGGCAATCTG CTGCAGTTGC TCGACAGCGT GGACTGGATG GCCGAGGGAC TGGTCATTGA CAACGACACC CTGCCTTCAG ATTTTTGGGA CCAGTTGACC GGGTGCGACG GGGACTGCCA GGAATGCGGA TATTGTCAGG CCCTGTTGCA GAGTGCTGGC AGACCGACCC CTCTTGGGCC CTGGGGAAAC CATGCCTGA
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Protein sequence | MRFDIPFLPD PEYLQALTRF EPDLATLHFS LHAPGIPDAR ARLREVETDR LIDLLRLGPG CDRLALLNSR LHTPAFLREP AARRPLLNAL ERLLAADVCQ GIVVADPYLL NVLGDDSPHL AGALQAVPSV NARLASVHAI RAWRTVIEEA GFLPPARLVL DRELNRDPGQ LETLSAACRR FWPDQEVFLL ANEGCLPHCP YKPAHDGQIA LAACDLTAEA TFELNATAGC VRHLLRDPAA VLRSPFIRPE DGERLAGMVD GLKLCGRNMG SRFCLRVLRA YVQGRFSGNL LQLLDSVDWM AEGLVIDNDT LPSDFWDQLT GCDGDCQECG YCQALLQSAG RPTPLGPWGN HA
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