Gene Dret_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1302 
Symbol 
ID8419131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1522536 
End bp1524779 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content62% 
IMG OID645037878 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_003198168 
Protein GI258405426 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.193601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.183958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGTA ATAAACTCAT TCGCGAATTT ACGGCCCTGG CCCTTGTATT CTGCGCCGCC 
TTGCTCGGCG TCAGTCTGGC AACTTACTCC CCGATGGATC CGGGCTTCAA CCAGCGCCTC
AGCAGCGGAT TTACGGTCCA CAACCAAGCC GGAATTGTTG GAGCGTATCT CGCCGGACTC
CTGGTTGATC TTTTCGGGAT TGGGGCTGCG GCCGCTCCGG TGGGAGCCGC CTGGGGTGCG
CTGGCGTGTT TCGTGAAGCG TCTGCGCCCG CGGTGGTGGC GCTGGATCGG CTTCGGCCTC
ATTTTTCTCT GCCTGACCGG CTGGGCCGCC CACCCCTGGG CTCGCGAACA TGTCCATCTC
CAGGCCCTCC AAGGCGGCGG GCTCCTCGGC CGGCTGGTCC ACGACACGGC GGTCTCCTAT
CTGCGGGCTC TGGGGGCTGG CCTGGTCCTG GCCTTCGTCG GTCTCGTCGG CCTCCAATTG
AGCCTCGGGC TCTCCTGGAG CACCCTGGGC AAGCGATTCC GCAGCCGCCT GCATGACCAG
TGGGCCAAGC ACGCCGAACG CAAAGCACGA AAACAAAGTG CCAAAGCCGC CAAGCGGTCG
TCCGCAGGGA AAAAGGAACC CAAAACCGCA GCTTCCAAAG GCAAAAACCC ATCCAAAACC
ACCCCAAAAG AATCCCCAAC CGCTGCCGCG ACCGGACAGC AAGGCGCCCC GGCTGCTGGA
AAAAGGGGGA ATTCCCCAGA AGCCGCGCCG CAGTCCGCGC CAGCCGAGAC CCGCTCAGTT
TCAGGCGCTC GGCACAGTCG CCAGGCCTAT CCACCGGCCG AACTCCTGCA GCCGGTTTCG
GAAAGTCGCC ACGCCATCTC TCCGCAAGAG CAGGAAGAAT TGTCACAACG CCTCAGTGAG
GGACTGGCCG ATTTCAATAT CCAGGGCGAG GTGCGCAAGA TCATGCCCGG GCCGGTGGTG
ACCATGCTCG AATTCAAACC GGCCCCCGGG GTCAAGGTCA GCCGTATCGC GGGACTCAAC
GACGATCTCG CCCGAGCGCT CAAGGCCCTG GCCGTGCGTA TTGAAGCACC GCTACCGGGC
AAGGACACCG TGGGCATCGA AATCCCCAAC AAAAACCGGC AGACCGTATT TTTCCGGGAA
GTGGTCGAGT CCGACGCCTT CACCCGAACC AAGGCGGCCC TGCCCCTGGC CCTGGGCAAA
GACATCCAGG GCCAGCCCCG TGTCGAGGAT CTGACCAGGA TGCCCCACCT GCTGGTGGCC
GGGGCGACCG GAGCCGGCAA ATCCGTCTGC CTGAACACCA TCCTGCTCAG CCTGCTCTTC
AAATCGTCAC CAGAGGAACT CAAGCTCCTG CTCATTGACC CCAAACGGAT CGAGATGGCC
GGCTACGCCA AACTCCCGCA CCTGGTCCAT CCGGTGGTCA CCGACACCCA TCTGGCCAAA
AACGCCCTGG AATGGGCGGT TTCGGAGATG GAAAGCCGGT ACGACGCCAT GGCCCGCCTC
AGTGTGCGGA ATATTGCCAG TTACAACGCT AAACTTGCTT CCCTCGGCGA GGAGAGGCCT
CCGGAGTTGG CCGATCTGAA GCCGTTGCCC TATCTGGTGA TCATTATTGA CGAGATGGCC
GACCTCATGC TCACGGCAGG CAAGGAAGTG GAACAATCCA TCGTCCGCTT GGCCCAGCTC
GCCCGGGCGG CGGGCGTCCA TCTGATCCTG GCCACCCAGC GCCCCTCAGT GGACGTGGTC
ACCGGTTTGA TCAAAGCCAA CTTTCCGACC CGGATCGCGT TTCAGGTCAG CTCCAAACAC
GATTCACGGA CCATTCTCGA CGGTGTGGGT GCTGAGCACC TCCTCGGGCG CGGGGACATG
CTTTACAAGG GCGGGGCCGG CAAACTGCAA CGCCTGCACG GCGCGTTTCT CAGCGATGAG
GAAATCAGCG AAGTCATAGA TTTCTGGTGC CACAAGCACC ATCCCGAATA CGAAGTCGAT
CTCACCGAAT GGGGCACCTC GGACAACGGC TCCGGAGGTG GGGACAACAA CGGTGCCGGC
AGCGACATCG TGGACGACCC CATGTACCAG CAGGCCATCG ACTTTGTCGC CGAACAGGGC
AAAGGGTCCA TCTCCATGCT CCAGCGCCGC CTGCGCGTCG GATTCAACCG GGCGGCCCGA
TTTATCGAAC AGATGGAACG CGACGGGATT CTGGGCCCTC AGGAAGGGAG CAAACCCCGG
CCCTATATAC GTGGCGGGGA GTGA
 
Protein sequence
MDGNKLIREF TALALVFCAA LLGVSLATYS PMDPGFNQRL SSGFTVHNQA GIVGAYLAGL 
LVDLFGIGAA AAPVGAAWGA LACFVKRLRP RWWRWIGFGL IFLCLTGWAA HPWAREHVHL
QALQGGGLLG RLVHDTAVSY LRALGAGLVL AFVGLVGLQL SLGLSWSTLG KRFRSRLHDQ
WAKHAERKAR KQSAKAAKRS SAGKKEPKTA ASKGKNPSKT TPKESPTAAA TGQQGAPAAG
KRGNSPEAAP QSAPAETRSV SGARHSRQAY PPAELLQPVS ESRHAISPQE QEELSQRLSE
GLADFNIQGE VRKIMPGPVV TMLEFKPAPG VKVSRIAGLN DDLARALKAL AVRIEAPLPG
KDTVGIEIPN KNRQTVFFRE VVESDAFTRT KAALPLALGK DIQGQPRVED LTRMPHLLVA
GATGAGKSVC LNTILLSLLF KSSPEELKLL LIDPKRIEMA GYAKLPHLVH PVVTDTHLAK
NALEWAVSEM ESRYDAMARL SVRNIASYNA KLASLGEERP PELADLKPLP YLVIIIDEMA
DLMLTAGKEV EQSIVRLAQL ARAAGVHLIL ATQRPSVDVV TGLIKANFPT RIAFQVSSKH
DSRTILDGVG AEHLLGRGDM LYKGGAGKLQ RLHGAFLSDE EISEVIDFWC HKHHPEYEVD
LTEWGTSDNG SGGGDNNGAG SDIVDDPMYQ QAIDFVAEQG KGSISMLQRR LRVGFNRAAR
FIEQMERDGI LGPQEGSKPR PYIRGGE