| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1286 |
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| Symbol | |
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| ID | 8419114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1505303 |
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| End bp | 1506154 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037861 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_003198152 |
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| Protein GI | 258405410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.218784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.414124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATC TCGGGGCCCA TATGTCCATT GCCGGCAATC TCTGTAACGC CTTCGAGCAC
ATCCGGGCTG TTCAGGGGAC AGCGCTGCAG ATTTTTACCC GCAACCAGCG CCAATGGAAA
ATCCCGCCGC TCAGCAGCCA GGAAGTCGCC GATTTTCTGG CTGCCTGGGA GGATTGGGGA
GAGTATCCTG TGGTCGCTCA CGACTCCTAT CTCATCAATC TGGCCGGGAA CAAAGACGAG
GCGGTCCAGA AGTCCATTCA CGCCTTTACC GAAGAGTTGC GGCGGATTGA GGCCCTGTCC
ATATCAGGTC TGGTCACCCA TCCCGGTTCG CATCTTGGCG ACGGTCCGGA AAAGGGGTTG
CAACGCTACG TGGACCGTTT GGACCGTTGT TTTGCAGAAT CGGAAACCAG CCGGGGCATG
GTCCTGCTGG AAACCACGGC CGGACAAGGC ACCAACCTCG GCGCCCGCTT CGAGGAACTG
GCCTGGATCA TCGAGCATTC CCAGTATCCT GAGCGCCTCG GCGTTTGCCT TGACACCTGC
CACGTCTTTG CCGCCGGCTA CGAATTGCGC ACTGAAGAAG GCTACCAGCA GACCCGGGAC
CAATTCGAAC GCATCCTCGG ACTCGACCGC TTGCAGTGCG TTCATTGTAA CGATTCCAAG
GGGGAACTCG GGAGCCGGAA AGATCGCCAC GAGCATATCG GCCGGGGAAC GATCGGTTCC
CAGGGATTCG CCAACGTGGT CAATGATCCC GCGTTGGCAC AGATTCCGTT TATCCTGGAA
ACCCCGAAGA GCAAGGACCT GCACGAGGAT GTGGCCAATA TGCAGGCCCT ATGGGATCTG
GTTCGTCACT GA
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| Protein sequence | MQYLGAHMSI AGNLCNAFEH IRAVQGTALQ IFTRNQRQWK IPPLSSQEVA DFLAAWEDWG
EYPVVAHDSY LINLAGNKDE AVQKSIHAFT EELRRIEALS ISGLVTHPGS HLGDGPEKGL
QRYVDRLDRC FAESETSRGM VLLETTAGQG TNLGARFEEL AWIIEHSQYP ERLGVCLDTC
HVFAAGYELR TEEGYQQTRD QFERILGLDR LQCVHCNDSK GELGSRKDRH EHIGRGTIGS
QGFANVVNDP ALAQIPFILE TPKSKDLHED VANMQALWDL VRH
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