| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1275 |
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| Symbol | |
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| ID | 8419103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1495451 |
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| End bp | 1496134 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037850 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003198141 |
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| Protein GI | 258405399 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0265448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.247655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGCGAA CGAGTTTCAG CATTGTTTGT GTTCTGGCTT TGGCCTTGGT CCTGGCCGGT
TGCGCTACTG CACCGAATCA ACAGCAACGC GGTACGGCCA TCGGCACTGC TGCCGGTGCC
GGGGTCGGAG CTATTCTGGG GCAAGCGATC GGCAAGGACA CCAAAGGGAC CTTGATCGGA
GCCGGTATCG GCGCCGTGCT CGGCGGGATT GCCGGGAACC GGGTCGGCGC CTATATGGAC
CGCCAGGAAC AGGAATTGCG CAACGCCCTG GCCCAGGAAC GCGCCGCCAG CGTGCGCCGG
GAACAGGATA TCCTGCGGGC GACCTTTGAC AGCAATGTCC TGTTTGATTT CGACTCTGCC
AGGGTCAAAC CCGGCGGTGT GAGTGAACTC AATCGGGCTG CCTCGGTGTT CAACCGGTAT
CCCCAGACCC GTATCCGCGT TGAAGGCCAT ACCGACGCCA GCGGTTCGGA AGAGTACAAT
ATGGATCTTT CTCGGCGACG GGCTCAAGCG GTCAAGGATG TCCTGGTCCA GCAGGGCGTT
GATCCCCGCC GGGTTTCCAC TGTCGGGTAC GGCGAGACCC AGCCCGTGTC CTCGGATCCG
GCAGCAAACC GCAGAGTGGA AGTCGTGATC GAGCCGATTG TGGCCAACTC CAACTCCGGT
TCATCCTCTG GCTCAACATA TTGA
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| Protein sequence | MRRTSFSIVC VLALALVLAG CATAPNQQQR GTAIGTAAGA GVGAILGQAI GKDTKGTLIG
AGIGAVLGGI AGNRVGAYMD RQEQELRNAL AQERAASVRR EQDILRATFD SNVLFDFDSA
RVKPGGVSEL NRAASVFNRY PQTRIRVEGH TDASGSEEYN MDLSRRRAQA VKDVLVQQGV
DPRRVSTVGY GETQPVSSDP AANRRVEVVI EPIVANSNSG SSSGSTY
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