| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1262 |
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| Symbol | |
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| ID | 8419090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1480318 |
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| End bp | 1482378 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037837 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_003198128 |
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| Protein GI | 258405386 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.37271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0359143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCG AGCACGAGAA CCACCACTCC TCGAATTCCC ACGACCACGC GTCGCACCAC
GAACATATGG TTCAGGACTT TCGTCACCGG TTTTGGATCA GTCTTGTTTT GACCGTGCCG
GTGTTGGCCC TGTCGCCGAT GTTCAAGGCC CTGGTCGGAC TCGAGAACTG GTTCCGCTTT
TCCGGAGAAA TGTACGTCCT GCTCGCCGTT TCCACAGCAA TTTTTGTATA CGGGGGCAAA
CCGTTTTACG GTGGGCTGGT CAAAGAATTG CGGAAAAAAG AACCGGGGAT GATGACCCTT
ATCGGGTTGG CCATCAGCGT GGCCTTTGTC TACAGCGCCG CCGTGGCCCT GGGGTTTCCC
GGAAAGACCT TTTTCTGGGA AGTGGCCACC CTGATCGACA TCATGCTCGT GGGACATTGG
ATCGAAATGC GCTCGGTCAT GGCGGCTTCC TCGGCCTTGG AAGAACTCGC CAAACTGCTG
CCCGGCACCG CCCATAAATA CACGGAGGGC TCCACGACCG AGGAAGTGAC TGTCGAGCAA
TTGCAAAGCG GGGACAGGAT ATTAATCAAG CCTGGGGAAA AGATCCCGGC CGACGGTGTC
ATTGAATCCG GGACTTCCTC GGTGGACGAA TCCATGTTGA CCGGGGAGGC AACGCCGGTT
GCCAAAAAGG AAGGCGAGGA AGTCATCGGC GGCGCCGTCA ACGGTGACGG AGCTTTGAGC
GTGACCGTCA AACAGACCGG GGAAGATTCC TATCTCTCCC AGGTCATCAA CCTCGTCCAC
CAGGCCCAGG AAAGCAAATC CAAATCCCAG AATCTTGCCG ACCGCGCCGC CTTGTGGTTG
ACCATCATCG CCTTGTCCGC CGGGGCGGTG ACATTATTCG TCTGGTTCGG TTTGGCTGGT
CGGGATTTCC TCTTTTCCCT GGAACGCACG GTCACGGTTA TGGTCATCAC CTGCCCGCAT
GCCTTGGGGC TGGCGGTTCC GCTTGTTGCG GCCGTCTCCA CATCCCTGGC GGCCGGTCGC
GGCTTTTTGA TCCGCGACCG CGGGGCGTTT GAAAAGGCCC GGGGATTGCA AGCGGTCCTT
TTCGACAAGA CCGGGACCCT GACTGAGGGC ACGTTCCGGG TCACGGCCGT GGACGCCGTC
GAAGGGGTCG AGCGCCGCGA GGTCCTGCGT TTGGCCGGCG GCGTGGAAAG CCAATCCGAG
CATCCCATCG CTCAGGGGGT TTTGGCCACC TTACGCGACA AGCATATCGA GGTGCCCGAC
ATTGAGCAGT TTGAAGCCAT CAAGGGCCAG GGGGCGACAG CACGCATTGA AGGCCGGCAG
GTCCAGGTGG TCAGTCCCGG CTATCTGGAT GATCAGGGGA TCGCCTACGA CGCCGGGGCG
TTTTCCGATA TTCTTGATCG GGGCAAGACC GCGGTCTTTG TCCTGGTTGA TGGTGAGGTC
CTTGGAGGGT TGGCGCTTTC GGACACGATC CGCACGTCGT CCAAGGAGGC GGTTGCGGTG
CTCAAAAAAA TGGGTATCCG CTGTCTCATG GTGACTGGAG ACAATCAGGA CACCGCGGAC
GCTGTGGCCG CGGAGGTCGG CATTGACGAG GTTTTTGCCG AAGTGCTGCC GGAATATAAG
GCCCAGACGG TCAAAGATGT TCAGCAGCGC GGTCTGGTCA CCGCCATGAT CGGCGACGGG
ATCAACGATG CCCCGGCCTT GGCCCAGGCC GATTTGGGCG TGGCCATCGG CGCTGGAACA
GACGTAGCGA TGGAGACCGC AGACATCGTT CTGGTCCGCA ACGACCCCCG CGATGTGGCC
GGGATCGTCT CTCTGGCCCG CGCGACCCAC CGGAAGATGG TCCAGAATCT CTTCTGGGCC
ACGGGCTATA ACGCTTTTGC CATCCCGTTG GCCGCCGGGA TTCTGGCTCC GTGGGGCTTT
TTCCTCAGTC CTGCCGCCGG GGCTGTTCTC ATGTCTCTGT CCACGGTGAT CGTGGCCATC
AACGCCCGGT TCCTCCGAGC CCGGCCGCTC CTCGTCGCCG CGGATGCTGG TTCCGACAGC
AATCCGGTCT CGGCGCAATG A
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| Protein sequence | MSSEHENHHS SNSHDHASHH EHMVQDFRHR FWISLVLTVP VLALSPMFKA LVGLENWFRF
SGEMYVLLAV STAIFVYGGK PFYGGLVKEL RKKEPGMMTL IGLAISVAFV YSAAVALGFP
GKTFFWEVAT LIDIMLVGHW IEMRSVMAAS SALEELAKLL PGTAHKYTEG STTEEVTVEQ
LQSGDRILIK PGEKIPADGV IESGTSSVDE SMLTGEATPV AKKEGEEVIG GAVNGDGALS
VTVKQTGEDS YLSQVINLVH QAQESKSKSQ NLADRAALWL TIIALSAGAV TLFVWFGLAG
RDFLFSLERT VTVMVITCPH ALGLAVPLVA AVSTSLAAGR GFLIRDRGAF EKARGLQAVL
FDKTGTLTEG TFRVTAVDAV EGVERREVLR LAGGVESQSE HPIAQGVLAT LRDKHIEVPD
IEQFEAIKGQ GATARIEGRQ VQVVSPGYLD DQGIAYDAGA FSDILDRGKT AVFVLVDGEV
LGGLALSDTI RTSSKEAVAV LKKMGIRCLM VTGDNQDTAD AVAAEVGIDE VFAEVLPEYK
AQTVKDVQQR GLVTAMIGDG INDAPALAQA DLGVAIGAGT DVAMETADIV LVRNDPRDVA
GIVSLARATH RKMVQNLFWA TGYNAFAIPL AAGILAPWGF FLSPAAGAVL MSLSTVIVAI
NARFLRARPL LVAADAGSDS NPVSAQ
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