Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1256 |
Symbol | |
ID | 8419084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1471685 |
End bp | 1475146 |
Gene Length | 3462 bp |
Protein Length | 1153 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645037831 |
Product | hypothetical protein |
Protein accession | YP_003198122 |
Protein GI | 258405380 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.537962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.251467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCC GTTTACGCCT GACCCGTCTG TCGATCCAGG ATTTCCCCGG GCTCACCGGG CCACTCGACC TCTCCCCCCA TCTTGGAGCG GAGTTGACAC TTGTCTCCGG CTCCAACGCC TCTGGCAAGA CCGTCACGGC CAGGGCCATT GCCGCTGCTC TCTGGCCCAA GTCCGCGCTG GCCTCGCAAG CCACGTTGCT GGCCCACTGG GCCAATAGCG AGCAAGAGTG GCGGGTGCGG CTGCGCGGGG GCAGACTCCA GACCCAGTGT AACGGCCGTG ACTGCGCTCC CCCGTATTTC GCGCCGGAAA CGGTCATGGA CCGCTATTTC CTGGACCTGC GCGACCTCCT GACTGCCGAT GATGCGGAAT TGGCCAGAAT CGTTCAGCGG GAATGCTCCG GGGGCTTTGA TATCCAGTCC GCCAAAGCAG CATTGGGATA TAAATTCGTG CGGCCGCGGC GCAACCACTC CAGCGAGGCC CTGCAACGGG CGCAGCGGGA GGTCCAGACC CTGCGAACCA CCTTGGCCGA TCTCAAACGC GAAGAAGACC GCTTGCCCGA ATTGCGGGCC CAACTCGATC AGCAGGACGA ACAGGCCCGG AGTGCCTGGC AATGGCAGCG CGGACTGGCC GCCCGCCAGC GTCAACGCGA GCGGGACCGT TTGGCCCGGG AATTGGCGGC CTATCCCGAC GCCGTTGCCA AGTGCACTGG AAACGAAGCC GCCGAACTCG ACCGGTTGCG AACCGCTTTA CAACAGGAAA AAGAACGTTG TGCCGCGGCA AACGACAAAA AGCGCCGGGC CCTGCAAACC ATGGCCGGGA CAGGCCTGGG CAGCGAGGGC GTCGCCCAGG GACTCCTCGA GACCGCTAAG GCTGAAGTCG AGACATTGGA GGAGGCGGAA CAAGCGCTGC AGGCGGCCCA AACCTCCCTG GCCCGGGCCC GAGCCGAACG TGACGCGGTC GCCAGACATC TCGGCACCGT TGCGGACGAC CCCGGCCCGG CTCCTGATGT CGCGGCTGTG CACGAATTGA CCCGGCTCGT GAGCGAGGGG CAAGAGCTCG AAGGACGGAT CTCGGGGCTG CGAGCCATCC AATCCTGGAT GGAAAGCCAT GACGACGACG CTTGGGCCCC CACTTCAGAG CAATTGGACG ATGCGGTGAA GGCATTGTGG CAATGGTTGG AAGCAGCCCC GGCGGCAAAC GGTGGCACGG TCCTGTGGCT GGCCTCGGCA GGATTCATGG TCGGCGCAGG GGCGCTAGCG GCCACCATAG TGCTGCCTGT CCCGGACGGA AGGGGAGTGG TTGCCAGCGT GCTGGCTGCG CTGGGCCTGG GAATCGGGGG GTGGTGTGTT CGTCAGCGGC AGATTGCGGC CCGGAACCGG GCTCGGGCAA AGGCAGTGCT GGATCGAAAT ACCGCGAGCG CCCCCGCGGC CTGGACTTTG GCTGAAGTTT TTGAGCACCT CCGCCGCCTC GGGGAACAAC GGGAGCGGGC CGTGGCCAGA CGCCGCCGCT TGGAGCGGTG GAGGGACCTC CAGCACCGGC TTCAGGAATG CGAGGCCCAA TGGGCCGCCT TTCAGGACCG GGTCCGGACT TGGACCTGCC ACCACGGATT GCAACCATCG GAATCCGTTT CCTTTCTGCG GCATCTCGCC TGGGAATTGC GGGCCTGGTC CGATGCCGAT CTCGCTGTCG GACAAGCGCA GGGAGAGGTG GATGACGCCG CTGAGCGGTG CGAGCGAACC CTGAAGGCGG TGCAAGGCCG TTTAGCGGTC TTTATTGCGC CGCCCGACAC GCTGCCGGAA GCCAAAGCGG CGCTGAAGGT CCTTCAGCAA CGCCAAACAC AGTGGCAAGA CGCGTCGACC GCCCTGGAAC ACGCGCAGGA AACACTGGAT CTCTCGCGCC AGCGATTGGC GGAAATCCAA AAGGAATATG CGGCCCTGTT CACTGATCGC GCCCTGGAGG CCGGTGACGA ACAGGGGCTG CTGCATTGTG TCCAACAGCG GGAGTCCTAT CTGGAGCTTT CTCAGAAACT TCACGCCATC CAGACCGCTC TGGAGAGCGA CGTCGCCATG CTTCCGGACA CGGTCTGGAC CTTCGATGAC GACTCCCTGC AACGCTTCCA GGAGCAGGCC TTGGCCGCTG AGCGGCAACG TACCGAAACG GCCAATGCGA TCGCCGTCCT GGAGGACCGT ATTGCCCGAG CCCGGACCAG CCGAGACATG GAAGAGGCCC AACAGCGGGT CTTGACTGCC AAAGACCAAC TCCTTCAAGA ACGGGACGAA GCGGCTGCGA CCACCGCAGG GTACCTGCTC TGCGAGCACC TCCAGCGCCA CTGCCGAGAC GAACAGGTGC CCGGGGTCAT GGGCCAGGCG AACACCCTGT TTGTCCAAAT GACCAATGGA GCCTTCCAAT TGGCGTTCGA CCCTCAGACG CCCGCCTTTC GGGCCCGCCA GAGCGCCAGC GGTCAAGAAC TGGAACTCGA CCAGCTTTCG GCAGCGACCC GAATCCAACT CCTGCTGGCG GTCCGCCTCG GCTTTGTCCA GACCCAGGAA AACCACGCCC GATTGCCCTT GGTATTGGAT GAAACCCTGG CCAATACCGA CGCCCTGCGG GCCGAATCGG TCATCCGCTC CCTTCTGGAG ATCGGGGGCA GCGACCGGCA AATATTGTAT TTCACCGCCC AGGACGAAGA AATCCAGAAA TGGCAGACAC TGGCCGAAAA GGCCGGAATC AGCTGGGCCC ATATCGATCT CGACACCGCC GGCCAGGAGG CGGAAAAGCG CTGCAAACCG CGACTATCTG CGGCACCTTC CCGCCGCCGC CACGTTCCGC CCGCCGGCGA TCTGGACCAT GCCGCATACG GAGAGCGCCT GGATGTCGCC GGTATCGATC CCCGCCGGGA TAGTGCGGAA TCCCTGCACA TCTGGTATGT GCTGGACGAT CCACCACTCG TGCAGCGGAT ACTTGAGATG GGCGTCACGC GGTGGGGCAG TCTGCAACAG TTGCTCGAGA CAAGGGCCTT ACGGCTCGTG TCGCCGGACG CTCCGGAAAT CCGCCGGGCA CGGGCTCTGG CACGGGCCTA CGAAGCCGCC TTGCGGGGGT GGCGTATCGG CCGGGGACGG CCGGTGGGAC AAGAGACCCT CGAAGCGGCC GGGGTCAAGA ATACCTTTCT CGGCGAGGTC AGTGCCATCC TGGACGAAGT CGACGGGAAT GCCGCTGCGC TCCTGGCTGC CCTGGAACAG GGCCGGGTCA AACGATTTCG CAAGGAAACC CGTCTGGCCA TGCGCGACTA CTTCGAGGCC CACGGCTTCC TGGACCAGCG TCTCCCCTTG GATGCCGCGG ACCTCCGGGA GCAGGTCATG ATTGCAACGG CCGAGGATCT GGAACAGGGG TGTCTGACAG TTGCGGATAT TGAGACGGTC TTGAAGCGAA CCGGGGGACA AGGCTTCGCC GGGGAAGACT GA
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Protein sequence | MSSRLRLTRL SIQDFPGLTG PLDLSPHLGA ELTLVSGSNA SGKTVTARAI AAALWPKSAL ASQATLLAHW ANSEQEWRVR LRGGRLQTQC NGRDCAPPYF APETVMDRYF LDLRDLLTAD DAELARIVQR ECSGGFDIQS AKAALGYKFV RPRRNHSSEA LQRAQREVQT LRTTLADLKR EEDRLPELRA QLDQQDEQAR SAWQWQRGLA ARQRQRERDR LARELAAYPD AVAKCTGNEA AELDRLRTAL QQEKERCAAA NDKKRRALQT MAGTGLGSEG VAQGLLETAK AEVETLEEAE QALQAAQTSL ARARAERDAV ARHLGTVADD PGPAPDVAAV HELTRLVSEG QELEGRISGL RAIQSWMESH DDDAWAPTSE QLDDAVKALW QWLEAAPAAN GGTVLWLASA GFMVGAGALA ATIVLPVPDG RGVVASVLAA LGLGIGGWCV RQRQIAARNR ARAKAVLDRN TASAPAAWTL AEVFEHLRRL GEQRERAVAR RRRLERWRDL QHRLQECEAQ WAAFQDRVRT WTCHHGLQPS ESVSFLRHLA WELRAWSDAD LAVGQAQGEV DDAAERCERT LKAVQGRLAV FIAPPDTLPE AKAALKVLQQ RQTQWQDAST ALEHAQETLD LSRQRLAEIQ KEYAALFTDR ALEAGDEQGL LHCVQQRESY LELSQKLHAI QTALESDVAM LPDTVWTFDD DSLQRFQEQA LAAERQRTET ANAIAVLEDR IARARTSRDM EEAQQRVLTA KDQLLQERDE AAATTAGYLL CEHLQRHCRD EQVPGVMGQA NTLFVQMTNG AFQLAFDPQT PAFRARQSAS GQELELDQLS AATRIQLLLA VRLGFVQTQE NHARLPLVLD ETLANTDALR AESVIRSLLE IGGSDRQILY FTAQDEEIQK WQTLAEKAGI SWAHIDLDTA GQEAEKRCKP RLSAAPSRRR HVPPAGDLDH AAYGERLDVA GIDPRRDSAE SLHIWYVLDD PPLVQRILEM GVTRWGSLQQ LLETRALRLV SPDAPEIRRA RALARAYEAA LRGWRIGRGR PVGQETLEAA GVKNTFLGEV SAILDEVDGN AAALLAALEQ GRVKRFRKET RLAMRDYFEA HGFLDQRLPL DAADLREQVM IATAEDLEQG CLTVADIETV LKRTGGQGFA GED
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