| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1234 |
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| Symbol | |
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| ID | 8419062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1446576 |
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| End bp | 1448465 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037809 |
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| Product | carbon-monoxide dehydrogenase, catalytic subunit |
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| Protein accession | YP_003198100 |
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| Protein GI | 258405358 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
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| TIGRFAM ID | [TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0405701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.377093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGG AAAAGCGGAG TATCGAAGAG TTGAGTCTCT GGGAAGACGC GCAACGAATG
ATCGCCAAAG CCCAGCGAGA AGGAGTGGAA ACGGTTTGGG ATCGCCTGGA GGAGCAGACC
CCGCATTGCA CTTTTTGCGA ACAAGGGTTG ACCTGTCAGA AATGCGTGAT GGGGCCTTGC
CGTATCAACC CCAAAGACAA CGGCAAAAAA CAACGGGGGG TCTGTGGCGC AGGTGCGGAT
CTGACCGTGG CCCGCAATTT CGGCCGCTTC ATTGCCGCAG GGGCGGCCTC GCACTCTGAC
CACGGGCGGG ATCTCGTCGA GGTACTCGAA GCTGTGGGGC AGGGAAAGAC CACTGATTAT
GCCGTACGCG ACGAAGACAA ACTCCGTCGC TTGGCCGATG AAGTCGGCGT AGAGCACGGG
GACAAATCAG TCCAGGAGAC CGCAGCCGCA CTGGCCGAGG TCTTTATGGA CGACTACAGT
TTTCGCCGCA ACGGGGTCAG TTTCGCGGCC CGGGCCCCGG AAAAACGGCG CCGTGTCTGG
GAGGAAACCG GAATCACCCC ACGCGGCGTG GATCGGGACG TGGTGGAGAT GATGCACCGC
ACCCACATGG GGGTGGACAG CGACGCCACA AGCATTTGCC TGCACTCGGC CCGCGTGGCT
TTGACCGACG GCTGGGGCGG CTCCATGATC GCCACCGAAC TGTCAGACAC CTTGTTCGGC
ACCCCGCAAC CCCGCCAATC CACAGCCAAT CTCAGCGTTC TCAAAGAAGA CCAGATCAAT
ATTCTGGTCC ACGGCCACAG CCCCATTGTT TCTGAAATGC TCTTGACCGC AGTCCAGGAC
CCGGATCTTC TTCAGGAGGC CCGGGATGCG GGCGCTGCAG GGATTAACCT CGCCGGACTC
TGTTGCACGG GCAACGAACT GCTCATGCGT CAGGGCGTGC CCATGGCTGG CAATCACCTC
ATGACCGAAC TCGCGCTCAT CACCGGGGCG GTGGAACTCA TGGTCGTGGA TTATCAATGC
ATCATGCCCA GTCTGGTGAC GATCGCCGGA TGTTATCACA CCCAATTCGT CTCCACCTCG
GAAAAGGCTC ATTTTACGGG CGCCACCCAT GTCGAATTCA CGTACACCAA TGCGATAGAG
CAAGCCAGAA ACGTGGTCCG CATGGCCATT GAGGCCTACC GCAATCGGGA TCCGCAGCGG
GTGGAGATCC CGGAGGGACC GATGCAGCTG ACCACCGGTT TTTCCAACGA GGCCATCCTG
GAGGCCCTGG GCGGCACTCC TGACCCGCTT CTCGATGCGC TCAAGAACGG AAGTGTCCGC
GGCGTCGTGG GAATCGTCGG TTGCAACAAT CCCAAACTCA AGCACGACCA TTGCCACGTC
AATCTGGCCC GGGAGCTGAT CAAGAAAGAT GTCCTGGTTT TGGCCACCGG CTGCGCCACT
GTCGCTTTGG GCAAGGCTGG TCTGCTCATG CCGGATGCCG CCGGAGAAGC CGGCTCCGGG
TTGCAGTCCG TCTGCCAATC CCTCGGCATC CCCCCGGTAC TGCATGTCGG CAGTTGTGTC
GACAACGCCC GCATCCTGCA TCTGTGCGGT GTGCTGGCCA ACGCCCTTGG CGTGGACATC
AGCGATCTGC CTGTGGCCGC CTCGGCCCCG GAATGGTATT CGGAAAAAGC CGCGGCTATC
GGCCTCTATG CCGTGGCCAG CGGGATCTAC ACCCATCTAG GGCTCCCACC GAACATCCAG
GGGAGTCAGA TGGTTACCGA TCTGGCCCTG AACGGACTCA ACGATGTGGT CGGTGCCGCG
TTTGGTGTTT CTCCAGATCC GTTTGAGGCG GCGGACATGA TCGACGCCCG GATACGGGAG
AAGCGAAAAG GGCTGGGATT GTCCGAGTGA
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| Protein sequence | MSKEKRSIEE LSLWEDAQRM IAKAQREGVE TVWDRLEEQT PHCTFCEQGL TCQKCVMGPC
RINPKDNGKK QRGVCGAGAD LTVARNFGRF IAAGAASHSD HGRDLVEVLE AVGQGKTTDY
AVRDEDKLRR LADEVGVEHG DKSVQETAAA LAEVFMDDYS FRRNGVSFAA RAPEKRRRVW
EETGITPRGV DRDVVEMMHR THMGVDSDAT SICLHSARVA LTDGWGGSMI ATELSDTLFG
TPQPRQSTAN LSVLKEDQIN ILVHGHSPIV SEMLLTAVQD PDLLQEARDA GAAGINLAGL
CCTGNELLMR QGVPMAGNHL MTELALITGA VELMVVDYQC IMPSLVTIAG CYHTQFVSTS
EKAHFTGATH VEFTYTNAIE QARNVVRMAI EAYRNRDPQR VEIPEGPMQL TTGFSNEAIL
EALGGTPDPL LDALKNGSVR GVVGIVGCNN PKLKHDHCHV NLARELIKKD VLVLATGCAT
VALGKAGLLM PDAAGEAGSG LQSVCQSLGI PPVLHVGSCV DNARILHLCG VLANALGVDI
SDLPVAASAP EWYSEKAAAI GLYAVASGIY THLGLPPNIQ GSQMVTDLAL NGLNDVVGAA
FGVSPDPFEA ADMIDARIRE KRKGLGLSE
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