| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1151 |
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| Symbol | |
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| ID | 8418979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1350483 |
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| End bp | 1351868 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645037726 |
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| Product | D-serine ammonia-lyase |
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| Protein accession | YP_003198017 |
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| Protein GI | 258405275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3048] D-serine dehydratase |
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| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAGA CCATCGCCGG CAGAACCAAA GAACAGTGGT TCTCTTCTCA TCCCCTGCTC
GAACGTATCG TGGCCGGGGA GGAGGTCTTC TGGGCGAATC CGGAGACGGT AACGGCCGCG
ACCGCCCTGT CCCAGTTGGA TATCCAGGCG GCTGATGTCT TTGACGCGGC CGAGCGCCTC
CGACGGTTCG CGCCGTATAT TCGAACCGTC TTTCCACAAA CAGAGCCAGA CGGCGGGATT
ATCGAATCGC CGCTCCGCGC CATACCGTCC ATGCAGCGCG CATTGAGCCG GGAACGCGAC
ACAGCGTTTC CGGGCCGGCT GCTGCTCAAA TGCGATTCGG AACTCCCGAT TTCCGGTTCC
ATCAAGGCTC GGGGCGGGAT CTACGAAGTC CTCAAGCACG CCGAACATCT GGCCCTGGAG
CACGGCTTAC TCTCGCGCAG CGACGAGTAC GCTCGCCTGA GCGAACCCCG CTTCTCCGAC
TTCTTCAGCC GCTACCGTAT CGCGGTCGGT TCCACCGGCA ACCTCGGGCT GTCCATCGGC
ATCATGGGCG CCACGCTCGG TTTTCAGGTC ACGGTGCACA TGTCCGCCGA CGCCAAGGCC
TGGAAAAAGG AACTCTTGCG CGCCAAGGGG GTGCGCGTGG TTGAATACGA AGACGACTAC
GGCCGGGCTG TGGCTGAGGG ACGCAGCCAG GCCGCTACCG ATCCCGGCTG CCACTTTGTG
GATGACGAAA ATTCCCGCGA CCTCTTCCTG GGCTATGCCG TGGCTGGGGA ACGTCTCAAA
CGCCAATTCG CTGAGCAGGG GATAACCGTG GACGCGGATC ATCCGCTCCT GGCGTATCTC
CCCTGTGGTG TGGGCGGCGG TCCGGGCGGC GTGGCCTTTG GTCTCAAGCT CGCCTTCGGA
GATCACGTCC ACTGCTTCTT TGCCGAGCCG ACCCATGCCC CGGCCATGCT GCTCGGGCTG
TACACCAAGG AATACGACCG CGTCAGCGTT CAGGATTTTG GTCTGGACAA CCGTACCGCT
GCGGACGGAC TGGCTGTCGG TCGAGCATCC GGTTTCGTGG CCAGGCGTAT GGGCCCGCTT
CTGGATGGAG CGTACACCGT GGACGACACG ACCATGCTCC GGGATCTGGC CCGGCTGTGG
CAAACAGAAG CCCTCTTTCT GGAGCCCTCG GCTTTGGCCG GCATGGCTGG GCCGCATCGG
GTGGTGGAGG CGCCGGAGTA TCTGGCACGG CACGGTCTGC GGGATGTGCT GGACCAGGCC
ACACACCTGG TCTGGGGCAC CGGGGGGTCG ATGGTGCCGG AGGGGGAACG AAGGGAACTT
TTACCTGAGA ATGATATTGA AAAATTTCAG AATTGCAGTC TTGACCATGG AGGATTGGGG
AATTGA
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| Protein sequence | MHQTIAGRTK EQWFSSHPLL ERIVAGEEVF WANPETVTAA TALSQLDIQA ADVFDAAERL
RRFAPYIRTV FPQTEPDGGI IESPLRAIPS MQRALSRERD TAFPGRLLLK CDSELPISGS
IKARGGIYEV LKHAEHLALE HGLLSRSDEY ARLSEPRFSD FFSRYRIAVG STGNLGLSIG
IMGATLGFQV TVHMSADAKA WKKELLRAKG VRVVEYEDDY GRAVAEGRSQ AATDPGCHFV
DDENSRDLFL GYAVAGERLK RQFAEQGITV DADHPLLAYL PCGVGGGPGG VAFGLKLAFG
DHVHCFFAEP THAPAMLLGL YTKEYDRVSV QDFGLDNRTA ADGLAVGRAS GFVARRMGPL
LDGAYTVDDT TMLRDLARLW QTEALFLEPS ALAGMAGPHR VVEAPEYLAR HGLRDVLDQA
THLVWGTGGS MVPEGERREL LPENDIEKFQ NCSLDHGGLG N
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