Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1139 |
Symbol | |
ID | 8418966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1335301 |
End bp | 1336608 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037713 |
Product | Phenylacetate--CoA ligase |
Protein accession | YP_003198005 |
Protein GI | 258405263 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000376262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTACG ATGTGGAAAA GGAAACCTTG CCCCGCGAAG AACTCGAAGC ATTGCAATTG CGCAAGTTGC AGTCCCTCGT GGAGCGCGTC TACTACAACG TGCCCTTCTA TCGCGAAAAA CTGGATGAAG CCGGAGTCAG GCCCGAAGAC ATCCGCAGCC TGCGGGATGT ACAATTCCTC CCGTTTACCG AAAAGCAGGA TCTGCGCAAC AATTACCCCT TTGGCCTCTT TGCCGTCCCC CGCGAAAATG TCGTCCGCAT CCACGCCTCT TCCGGAACGA CTGGCAAGGC CACTGTCGTC GGCTATACCC AGCGCGATGT CCGCAATTGG GCCACGCTCA TGGCCCGTTC GCTGATGGCC GCCGGAGCGA CACGGCGGGA CACCGTGCAC AACGCTTACG GCTACGGGTT GTTTACCGGC GGCCTGGGCG TCCATTACGG CGCGGAACAA CTCGGGGCCT CTATCGTGCC CATTTCAGGC GGCGGCACCA AGCGCCAGGC CACCCTGCTC AAGGACTTCG GCCCCACTGT CATCTGCTGC ACCCCTTCCT ACGCCCTGCA TCTCTATGAA ACGGCCAAGG CCGGTGGCCT GGATGTTGAA AATCTTCCCC TGCACACCGG AATCTTCGGC GCCGAACCTT GGACCGACGA AATGCGAGCC GACCTCGAAT CCAAGCTGGG CATCAAGGCC TTGGACATCT ATGGTCTGTC CGAGATCATG GGACCCGGCG TCGCCATGGA ATGCCGCCCC GCCCAGGACG GGCTGCATAT CTGGGAAGAC CACTTCCTGG TCGAGACCAT CGATCCCGAA ACCGGGGAAC AGCTTGCTCC CGGGGAGACC GGGGAATTGG TGATCACGAC GCTGTCCAAG GAGGCGCAGC CGCTCCTGCG CTACCGCACC CGGGACCTGA CCCGCCTGAA CACCGTCCCC TGCCGCTGCG GGCGGACCCA TACCCGTATG GCCCGGGTCA TGGGACGCAG TGACGACATG CTCATCATCC GTGGCGTGAA CGTCTTTCCG TCGCAAATCG AGAGCATCCT GCTCGAAACC GAGGGCATTG CGCCGCACTA CCAGCTCATC CTGCGCCGTC ACGGTTCGCT GGACACACTT GAAATCCACG TCGAAATCGA CGATTCCACT TTCTCCGACG AGATCAAGCA TTTACAACGT CTTGAGCGCA AGATACAGAA AAACATCAAA GAGTTCCTGG GTGTGACCGC GGATATCAAG CTCGCCGAAC CGATGAGTAT CGCCCGCTCC CAGGGCAAAG CCCAGCGGAT TATCGATCGT CGCCACGAAG CCGAATAA
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Protein sequence | MLYDVEKETL PREELEALQL RKLQSLVERV YYNVPFYREK LDEAGVRPED IRSLRDVQFL PFTEKQDLRN NYPFGLFAVP RENVVRIHAS SGTTGKATVV GYTQRDVRNW ATLMARSLMA AGATRRDTVH NAYGYGLFTG GLGVHYGAEQ LGASIVPISG GGTKRQATLL KDFGPTVICC TPSYALHLYE TAKAGGLDVE NLPLHTGIFG AEPWTDEMRA DLESKLGIKA LDIYGLSEIM GPGVAMECRP AQDGLHIWED HFLVETIDPE TGEQLAPGET GELVITTLSK EAQPLLRYRT RDLTRLNTVP CRCGRTHTRM ARVMGRSDDM LIIRGVNVFP SQIESILLET EGIAPHYQLI LRRHGSLDTL EIHVEIDDST FSDEIKHLQR LERKIQKNIK EFLGVTADIK LAEPMSIARS QGKAQRIIDR RHEAE
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