| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1118 |
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| Symbol | ileS |
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| ID | 8418945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1308469 |
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| End bp | 1311285 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037692 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_003197984 |
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| Protein GI | 258405242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00413581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0891258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT ACAAAGCGAC CCTCAATTTG CCGAAAACTT CTTTTCCCAT GCGGGCCAAT
CTGGCCAAAA ATGAACCCAA GATGCTCAAT TTTTGGGACG CCAACAATAT TTACTCCGCC
ATGGCCCGCA AAGACGGTGA TCGTCCCCCT TTTGTCCTGC ATGACGGCCC TCCGTATGCC
AACGGCAATA TCCATTTGGG CACGGCCATG AACAAGGTCC TCAAGGACAT GATCGTCAAG
TACAAGAACA TGCAGGGGCA TAACGCTGAA TACGTACCGG GTTGGGACTG TCACGGGCTC
CCGATTGAAC TCAAGGTCGA GCGGGAACTT GGCTCGGACA AAAAATCGAT GTCCATTTTG
GACATCCGCA AACAATGCCG GGAATACGCC CTGAAATATC TCGACATCCA GCGAGAAGAA
TTTAAGAAAC TCGGTGTCTT AGGCACCTGG GACGCCCCGT ACCTGACCAT GAACCCGAGC
TACGAAGCGG CGACGGCCCG GGAACTGGCC CGGTTCATGG AGCGCGGCAG CGTGGTGCGG
AACAAAAAGC CGATCTACTG GTGTTGTTCC TGCGAGACCG CTTTGGCCGA AGCCGAAGTC
GAATACGGCG AACACACCTC CCCGTCGATC TATGTCCGCT TTCCGCTCCC TGACGATCGC
TTGCGCGAAT CCATCCCCCA GGCCGACCCG GACCGGACCT CACTGGTCAT CTGGACCACC
ACGCCGTGGA CGATCCCCGA TAATATGGCC GTGGCCGTGC ATCCCGATCT GGAGTATGTC
CTGGTTCGCG CCCACGGGAA TGATTATCTG CTCGCGGAAG AATTGTGGCA GGAACGTGCC
GAAGGCTTCG GCTGGGAAAC GACTGAAATT CTTGGCCGGG TCTCTGGGGC CGCCCTCGAG
GGGCTCAACG CCCGCCATCC GCTGTATAAC CGTCACTCAC CGATTGTTCT GGCCGACTAC
GTCAGCACCG ACGCCGGCAC AGGATGCGTC CACACCGCCC CGGGCCACGG TCAGGAAGAC
TTTGAAACCG GACAACGCTA CGGCCTGGAG GTCTATTCCC CTCTGGATGA CCAGGGCCGC
TTTCTGTCCA GTGTCCCCTT TTTCGCCGGG TTGACCGTAT TCGAGGCCAA TCCCGAGGTC
ATCGCCAAGC TCCAGGAATT CGGCATGCTG CTGGCCCAGG AGGAGATCAG CCACTCCTAC
CCCCATTGCT GGCGGTGCAA AAAGCCAGTC ATCTTCCGGG CCACGACGCA GTGGTTTATC
TCTATGGAGG CCAACGGATT GCGGGACAAG GCCCTCAAGG CCATTGACTC CGAAGTCCAA
TGGATCCCCT CCTGGGGCCG GGAACGGATC CACAGCATGA TCGCCAATCG TCCGGATTGG
TGCATCTCGC GCCAGCGCAT GTGGGGCGTG CCGATTATTG CTCTCCTGTG CGAGGGATGC
GGCGAAGCGT ATTACGAGGC CGACTGGGTG CATGCCATCG TCGACCGCTT TGCCGAACAT
GAACGCGGCG CCGACTACTG GTTCGAGGCG TCTTTGGAAG ACATCGTCCC CGAGGGACTG
ACCTGCCCCT CGTGCGGGGG CACGCATTGG GCCAAAGAGG ACGACATCCT TGATGTCTGG
TTCGATTCCG GCACGAGCTT CGCCGCCGTG GTTGAACAAC GCGACGAATG CCGGTATCCG
GCCGATCTGT ACCTCGAAGG CACCGACCAG CACCGGGGAT GGTTCCACAG TTCTCTGCTG
GCCTCGGTCG GCACCCGGGA TCAGGCCCCG TACAAAACCG TGCTGACCCA CGGCTTCGTG
GTCGATGGCC AGGGCCGGAA AATGTCCAAA TCCATCGGCA ACGTGGTCGC GCCCCAGGAG
ATCATGGACA AATACGGCGC CGAAATCCTG CGCATGTGGG TCGCCTCGGA GAACTACCAG
GAAGATCTGC GCATCTCGGA AAATATCCTC AAGCAATTGG TGGACGCCTA CCGCCGCATC
CGCAACACCT GCAGGTTTAT CCTGGGCAAT CTCGCCGATT TCGATCCCAG CCAAAATGGT
CTGCCTCTGG ACGAGGTCCT CTCCTTCGAT CGTTATGCCC TGGATCTGAT CCAGACCAGA
CACCAGCGGA TGCAAGAGGC CTACAGCCGT TACGAATTCC ACAAGGTCTT TCACACCCTG
CATCACATGT GCGTGACTGA CTTGAGCGCT TTTTATCTGG ACATCCTCAA GGACCGGCTC
TACGTCTCGG CCCCCGGGAG CATCGAGCGG CGCTCAGCCC AGACCGTCCT CCACCGTATC
CTGCAGATGC TCTTGCGCGA TATGGCGCCA TTTCTCAGCT TCACCGCCGA AGAACTCTTT
CAGCATCTGC CCGAATGTAT GCGCCCTGAC GTTCCTTCGG TCTTCACGCT TTCTCCGGTG
GAACCGGTTC AGGATCTGCT GCGCGAAGAC GAACGCGCCC TGTGGGACCA TGTCTGCTCC
CTGCGCGAAG AAATCACCAA GGCCATCGAA CCCTGGCGCA AATCCGGGGA CATCGGGCAC
CCCTTGAGCG CGGCAGTCAC TATCTATGCC CCTGAACCGC TGCACAGTGA ACTCTCCAGC
GTGGCCGGTC AGCTGCGGGA AATCTGTATC GTTTCCCAAG CCTCCTTGGA GCAGGCGGAC
TCCGCCCCAG AGGATGCCGG CTTTGCAAGC GATGTCTTTC CGGGCCTGAG CATTGCGGTC
AACGCGGCGC AGGGAGACAA ATGCCCTCGC TGCTGGGTGT TCAGTCCGGA AATCGGATCC
GACGCCGCGC ACCCGGATGT CTGCCCGCGG TGCAGCGCGG TATTGCAGCA ATTGTAG
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| Protein sequence | MADYKATLNL PKTSFPMRAN LAKNEPKMLN FWDANNIYSA MARKDGDRPP FVLHDGPPYA
NGNIHLGTAM NKVLKDMIVK YKNMQGHNAE YVPGWDCHGL PIELKVEREL GSDKKSMSIL
DIRKQCREYA LKYLDIQREE FKKLGVLGTW DAPYLTMNPS YEAATARELA RFMERGSVVR
NKKPIYWCCS CETALAEAEV EYGEHTSPSI YVRFPLPDDR LRESIPQADP DRTSLVIWTT
TPWTIPDNMA VAVHPDLEYV LVRAHGNDYL LAEELWQERA EGFGWETTEI LGRVSGAALE
GLNARHPLYN RHSPIVLADY VSTDAGTGCV HTAPGHGQED FETGQRYGLE VYSPLDDQGR
FLSSVPFFAG LTVFEANPEV IAKLQEFGML LAQEEISHSY PHCWRCKKPV IFRATTQWFI
SMEANGLRDK ALKAIDSEVQ WIPSWGRERI HSMIANRPDW CISRQRMWGV PIIALLCEGC
GEAYYEADWV HAIVDRFAEH ERGADYWFEA SLEDIVPEGL TCPSCGGTHW AKEDDILDVW
FDSGTSFAAV VEQRDECRYP ADLYLEGTDQ HRGWFHSSLL ASVGTRDQAP YKTVLTHGFV
VDGQGRKMSK SIGNVVAPQE IMDKYGAEIL RMWVASENYQ EDLRISENIL KQLVDAYRRI
RNTCRFILGN LADFDPSQNG LPLDEVLSFD RYALDLIQTR HQRMQEAYSR YEFHKVFHTL
HHMCVTDLSA FYLDILKDRL YVSAPGSIER RSAQTVLHRI LQMLLRDMAP FLSFTAEELF
QHLPECMRPD VPSVFTLSPV EPVQDLLRED ERALWDHVCS LREEITKAIE PWRKSGDIGH
PLSAAVTIYA PEPLHSELSS VAGQLREICI VSQASLEQAD SAPEDAGFAS DVFPGLSIAV
NAAQGDKCPR CWVFSPEIGS DAAHPDVCPR CSAVLQQL
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