Gene Dret_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1113 
Symbol 
ID8418940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1305478 
End bp1305921 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content56% 
IMG OID645037687 
ProductNIL domain protein 
Protein accessionYP_003197979 
Protein GI258405237 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.646686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0231239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCCAAAACAA TGTCCGCCGT TCCATCCTGG CCTTGACCTT TCCGCCCTTG 
TTCTCGGGGC GGCCGATCAT GTGCAATCTG GCCAAACACT ATGAACTTGA CTTCAACATC
CTCAAGGCCA GTATATCGCC GCGCCGCGAA GGCAAGCTCG TCCTCGAGCT TTCCGGCAGT
GAAGAAGAAT TCCAGAAAGG GCTGAGCTAC CTCAAGGAAC ACGGGATCTC CATCGCCAAG
GTATCCCAGC AGATCTCACG CGACGAAGAT TCTTGTGTCC ATTGTGGTTT GTGCACCGCT
TTGTGTCCCA CCCAGGCCCT GAGCCTGGAC CATGAAACCC GCCATGTCCT GTTCGACGTG
GAAAAATGCA CGGCCTGCGG GGCCTGTACC CGTGTTTGTC CCGTTCACGC CATGCGCGTG
GATGTCGACG ATACTCTCTG GTAA
 
Protein sequence
MTETQNNVRR SILALTFPPL FSGRPIMCNL AKHYELDFNI LKASISPRRE GKLVLELSGS 
EEEFQKGLSY LKEHGISIAK VSQQISRDED SCVHCGLCTA LCPTQALSLD HETRHVLFDV
EKCTACGACT RVCPVHAMRV DVDDTLW