| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1076 |
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| Symbol | |
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| ID | 8418901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1267396 |
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| End bp | 1268484 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037648 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_003197942 |
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| Protein GI | 258405200 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.490079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.158086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTACT TGTTGAAACA ATTTCACGAT CCCCAATTGT GCCAAGCGCT TGTACGGGAT
CTTCAGCAAC GGATCGGAGA TGGTTTCCGG TTCATGGAAG TGTGCGGCAC GCATACGGTG
AGTATTTTTC AAAGCGGCCT TCGCTCTTTG CTCCCCGACA ACTTGACCCA TTTGTCCGGG
CCGGGGTGTC CCGTGTGTGT AACCCACGAA CGCGAAGTGG CGGCTTTTTT GGATCTCGCC
AGACAGCCCG GTGTCGTTGT GGCCACATTT GGGGATCTGC TTCGCGTTCC CGGTCCTGAG
GGTCGCAGTC TGAAGGCCGC TCAAGCCGAA GGGGCGCAGG TCGAGGTCGT GTATTCGCCG
TTTGACGCTT TGCAACTGGC CCAGGACCGA CCCGGGAAAC ATATCGTTTT TTTGGGAATC
GGGTTTGAAA CGACCGCTCC GACTGTGGCC GCCACATTGA AGACCGCCAA ACGTGACGCT
CTGTCCAATT TCAGTGTCCT GAGCCTGCAC AAACTGGTCC CTCCGGCCCT GCAGGCCTTG
ATGGACGACA CGGCCTGCGC CATTGACGGC TTTTTGCTCC CAGGGCATGT CTCCGCGGTG
ATCGGGACGC AACCGTATGC CTTTGTGGCC GAAAAATACA GGACGCCCGG AGCGGTGGCT
GGATTTGAAC CGGTGGATAT CCTCGCCGGA CTTCAGGAAC TTTTGCGTCA ACGTGAAGCC
GGTGAGCCCA GTATCGCCAA TGTCTATCCT CGAGTGGTGG GCGACCAGGG CAATGCGAAA
GCGATGGCCC TGATGGAGGA GGTCTTCGCG CCCTGCGACA CCCTGTGGCG GGGTCTTGGC
GAACTGCCGG GCAGCGGTTT GGAGATCCGC TCTGCGTTCG CGGACCACGA CGCCCGTCAG
GTGTTGGGCA TTGAATGGCC CGAGGTTCCG CCTTTGCCGG GGTGCCGTTG CGGGGACGTG
CTCAAAGGCA AGCTGAGTCC GGAGCAATGC CCCTTGTTCG GGACCCGGTG TACTCCTGCC
ACTGCTGTGG GACCGTGCAT GGTCTCCACC GAGGGCAGTT GCGCCGCCTA CTACAAATAC
CGTCTGTAA
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| Protein sequence | MEYLLKQFHD PQLCQALVRD LQQRIGDGFR FMEVCGTHTV SIFQSGLRSL LPDNLTHLSG
PGCPVCVTHE REVAAFLDLA RQPGVVVATF GDLLRVPGPE GRSLKAAQAE GAQVEVVYSP
FDALQLAQDR PGKHIVFLGI GFETTAPTVA ATLKTAKRDA LSNFSVLSLH KLVPPALQAL
MDDTACAIDG FLLPGHVSAV IGTQPYAFVA EKYRTPGAVA GFEPVDILAG LQELLRQREA
GEPSIANVYP RVVGDQGNAK AMALMEEVFA PCDTLWRGLG ELPGSGLEIR SAFADHDARQ
VLGIEWPEVP PLPGCRCGDV LKGKLSPEQC PLFGTRCTPA TAVGPCMVST EGSCAAYYKY
RL
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