Gene Dret_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1063 
Symbol 
ID8418888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand+ 
Start bp1253455 
End bp1254135 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content59% 
IMG OID645037635 
Productmetallophosphoesterase 
Protein accessionYP_003197929 
Protein GI258405187 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.895321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0287479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAT CGTTGCCGTT TTGGATTGTC GTGGGGGATA TCCACGAGCA GACCGCCAAT 
ATCCACAGGA TTCCTCACAT AGGTGAGGCT GCCGGGCTTA TCGTCAGCGG GGATATTACC 
AATGCCGGAC GGGTGGCCAA GGCCACGGAA GTCCTCGAGG AACTCCACCG GGTCAATCCC 
AACCTGTACG CCCAGATCGG GAATATGGAT TTTCCCGAGG TGACGGGTTT TTTGGAGCAG 
CGGGGATGGA ATATCCACGC CAGGGGGGTG GAGCTCGATG AGGATGTCGG TCTCATGGGG 
GTTGGCTATT CCAATGCGAC CCCGTTCGGG ACCCCCGCTG AAGTCGGGGA ACACGAACTT 
CATATGTGGC TGGATGTGGC CTACGCAGAT ATCAAGGATC TCGCGCACCA TATAGTGGTC 
TGCCATACTC CGCCCTACGG CACCCGTTCA GATGCCCTGG CAGACGGGAC CCATGTAGGG 
AGCCATTCGG TCCGCCGTTT TCTGGAGGCG GCCCAGCCGG ATGTCTGTGT CACCGGCCAT 
ATCCACGAGG CGGTCTCACA GGATTATCTG GGTCGGACTT TGATTCTCAA TCCCGGTATG 
CTTGCTGCGG GCGGATATGT CCTGCTGCAG CGGACGGCTG AGGGGATCCA CGCGGAACTG 
CGTTCGGTGA GGGAGGAGTG A
 
Protein sequence
MQTSLPFWIV VGDIHEQTAN IHRIPHIGEA AGLIVSGDIT NAGRVAKATE VLEELHRVNP 
NLYAQIGNMD FPEVTGFLEQ RGWNIHARGV ELDEDVGLMG VGYSNATPFG TPAEVGEHEL 
HMWLDVAYAD IKDLAHHIVV CHTPPYGTRS DALADGTHVG SHSVRRFLEA AQPDVCVTGH 
IHEAVSQDYL GRTLILNPGM LAAGGYVLLQ RTAEGIHAEL RSVREE