| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1038 |
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| Symbol | |
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| ID | 8418861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1226205 |
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| End bp | 1227590 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037608 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_003197904 |
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| Protein GI | 258405162 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00807921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCG ATAACTTGAT AAAGGAATTT CAAACTATCG TTGGTGAAGA AAACGCGTTC
ACCGACGAGG CCGATCGCCA CACCTATTCC TATGATTCCG CTGTCCTGGA ACCGGCTATT
CCCGAAATCG TTGTCCGGCC CACCAATAGC GAAGCCCTGG GTAAGGTGGT CAAACTGTGC
AATGACAACG GCTTGCCTTT AACTGTACGC GGAGCCGGCA CCAACCTCAG TGGCGGCACG
ATCCCCAGCA AGGAACGTGG CGTTGTCGTC TTGACCACAG CCTTGAACAA GATCCTCGAG
ATCAATGAAG ACGATATGTA TGCAGTGGTG CAGCCTGGTG TCATCACCGC TAAATTCGCT
CAGGAAGTGG CCGGTCGCGG TCTCTTCTAT CCTCCGGACC CCGGCAGTCA GGCCGTCTCG
ACCCTCGGCG GCAATGTGGC CGAAAACGCC GGCGGGTTAC GTGGTCTGAA ATACGGCGTG
ACCAAAGACT ACGTCATGGG CGTTGATTTC TTCGACACCA ACGGCGAACT GGTCAAGTCC
GGCGGTAAGA CCGTAAAATG CGTAACAGGC TTGAATCTGG CGGGTTTGAT GGTCGCTTCC
GAAGGCACCT TGAGCGTGTT CAACGAACTG ACCCTGAAGC TCGTCCCCCC ACCGCAAGCC
CAGAAAGCCA TGATGGCCGT GTTCGATTCC GTGGACAAAG CCTCAGAAAC CGTCTCCGCC
ATCATCGCCA ACAAAATCAT CCCCTGTACG CTGGAATTTT TGGACAACTT CACCATCCGC
ACCGTTGAGG ATTTCCGCCA CGCCGGACTG CCCACTGAAG CCGAGGCCCT GTTGCTCATC
GAAGTCGACG GCCACCCGCA GGAAGTGGAA GACGACGCAG AGAAGGTCAA AGAACTGTGC
ATGAAAATGG GCGCCACCAG CATCCAAGTC GCCGAAGACG CCGATCAGCG CGCCGCTGTT
TGGCAGGCCC GCCGCGATGC GCTGCCTGCA CTGGCCCGGT TGCGTCCCAC GACGGTCCTA
GAGGACGCCA CAGTGCCGCG GAGCAAGATC CCGGCCATGA TGAAGGCCCT GCAGAAGGTC
GCCGACAAGT ACGACCTGAC CATCGGGACC TTCGGGCACG CCGGCGACGG CAACCTGCAT
CCGACCATTT TGACCGACAA GCGCGACGAG AAGGAATACG AGCGCGTTGA AAAAGCGATC
GACGAGATCT TTGATGCCGC GCTGGCCATG GGCGGAACCC TTTCAGGCGA ACACGGCATC
GGCCTGGCCA AATCCAAATG GTTGGAAAAA GAGACCACCC GGGGAACGAT CCTCTACTCG
CAACGCCTGA AAAAAGCGCT GGATCCCAAC AACATCCTCA ACCCGGGTAA GATCATAGGA
GGCTAG
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| Protein sequence | MLSDNLIKEF QTIVGEENAF TDEADRHTYS YDSAVLEPAI PEIVVRPTNS EALGKVVKLC
NDNGLPLTVR GAGTNLSGGT IPSKERGVVV LTTALNKILE INEDDMYAVV QPGVITAKFA
QEVAGRGLFY PPDPGSQAVS TLGGNVAENA GGLRGLKYGV TKDYVMGVDF FDTNGELVKS
GGKTVKCVTG LNLAGLMVAS EGTLSVFNEL TLKLVPPPQA QKAMMAVFDS VDKASETVSA
IIANKIIPCT LEFLDNFTIR TVEDFRHAGL PTEAEALLLI EVDGHPQEVE DDAEKVKELC
MKMGATSIQV AEDADQRAAV WQARRDALPA LARLRPTTVL EDATVPRSKI PAMMKALQKV
ADKYDLTIGT FGHAGDGNLH PTILTDKRDE KEYERVEKAI DEIFDAALAM GGTLSGEHGI
GLAKSKWLEK ETTRGTILYS QRLKKALDPN NILNPGKIIG G
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