Gene Dret_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1035 
Symbol 
ID8418858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1218708 
End bp1220816 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content58% 
IMG OID645037605 
Productphosphate acetyltransferase 
Protein accessionYP_003197901 
Protein GI258405159 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0294331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.684952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA ATCTCTACAT CACGACCACG GAACCCCGCA GCGGCAAGTC GGCCATCGCC 
CTTGGCCTGA TGCAGCTTTT GATGCGGGAT ATCCGCAAGG TGGGCTTCTT TCGGCCCATC
ATCAACACCC CGTCACGCGA CGTTCGTGAC CACGACATCA ACTTGATCCA CTCCCAATTC
CATCTGGATA TGGAATACGA GGAATCCTTC GCCTTCACCC TCCAGGAAGC CAAGGACCTC
CTCAACAACG GTAAGCAGGA TCTCCTTTTT GAGACCATCC TCAAAAAGTA CAAGGAAGTT
GAAGCGAAAT GCGATTTTGT CCTCTGCGAA GGATCCGACT TCCAGGACAC CGCGTCGGCT
TTCGAGTTTG ACATCAACGC CGAAATCGCC GCCAACCTTG GCGCTCCGCT GCTGCTGGTC
GCTAACGGCC ACCGTAAGAC TGCACAGGAA GTCGTCAGCG CGACCCAGCT GGCCCTCGAC
TCTTATGAAG ACAAGAGTGT CGACATCCTG GCCACGGTCA TCAACCGCGC GGCTCCGGAG
ATCGACCAGT CCATCGCCCG CGAACTGTCC TGCACCTCCT GTAAGGACAA GTCCATGCTG
GTCTATGTCA TCCCTGAAGA GGACACCCTG GGCAAACCGA CCATGTCCGA TGTCAAAAAG
TGGATCAACG CCACTGTCCT CTACGGCGAA GACCGCATGG AGAACCTGAT TTCCGACAAT
GTGGTCGCGG CGATGCAGAT CGGCAATTTT CTGGACTACA TCACGCAGGG AAGCCTGGTC
ATCACCCCCG GCGACCGCTC GGACATCATT TTGAGCAGTC TCGCCTCGCG GCTTTCTTCG
AACTTTCCTG ACATTTCAGG CATCCTGCTG ACAGGCGGCA TCTATCCGTC GAAGAATGTG
CTCAAGCTCA TCGACGGCTG GACCGGCGTG CCCATGCCGG TCATGCTGGC CAAAGACCAC
ACCTACCGGA CCACACGCAC GGTCGACGCC CTGTACGGGA AAATCGAACC CGACAATCCG
AAAAAAATCG CCACCGCGCT TGGCGTCTTT GAAGCCAACG TCAACACCGA AGAGTTGCGC
CTGCGGCTGG TGGAAACCAA GTCGACCAAG GTCACGCCCC GGATGTTCGA GTACTCCCTG
GTCGAAAAAG CCAAAGCCAA CAAACAGCGC ATCGTGCTGC CCGAAGGAAC AAGTGACAGG
GTCCTGCGCG GGGCGGACAT CATTCTGCGC CGCGGCGTCT GCGACGTGAC CATCCTTGGT
GACCCCGCCA AGCTCAAGGC CAAAGCCTCA GAACTCGGTC TGGACCTCGA CGGGGCCCAA
CTGATCAATC CCATTGATGC CGAGAACCTT GACGACTACG CCGCCGCCTA CTTTGAACTG
CGCAAGCACA AAGGGGTGAC CGAGGAGCAG GCCAAGGACG CCATGAGCGA TCCCACCTAC
TATGCCACAA TGATGGTCCA CAAAGGCGAC GCCGACGGCA TGGTTTCCGG ATCGATCACC
ACCACACAGC AGACCATTCT GCCCGCTTTC CAGATCATCA AGACCAAACC CGGCGCTTCC
ATCGTCTCCA GTGTCTTTTT GATGTGTCTG CGGGATCGCG TTCTGGTTTA CGGCGACTGC
GCCGTCAATC CGAATCCCAA CGCCCAGCAG TTGGCCGAAA TCGCTTTGAG TTCCGCAGAA
ACGGCCCGGA TTTTCGGCGT CGATCCCAAG GTGGCCATGC TCTCCTACTC CACCGGAGCC
TCGGGCAAGG GTGACGAGGT CGAGAAGGTC CGTGAAGCGA CGGCGCTGGC CAAGGAACGC
CGCCCTGACC TTTTGCTGGA AGGCCCACTG CAGTACGACG CCGCCATCGA CCCGGACGTG
GCCAAAACCA AACTGCCCGA CAGCAATGTC GCCGGGAAGG CCACTGTGTT CATCTTCCCT
GACCTGAACA CCGGGAACAA TACCTACAAG GCTGTCCAGC GGTCTGCTCA GGCCGTGGCC
ATCGGTCCGG TCCTGCAGGG CCTGAATAAG CCGGTGAACG ACCTCAGCCG CGGCTGCACC
ATTACCGATA TCGTGAATAC CGTGGCCATC ACGGCCATCC AAGCGCAAGC AGAAAAGGGA
TTGATATGA
 
Protein sequence
MAKNLYITTT EPRSGKSAIA LGLMQLLMRD IRKVGFFRPI INTPSRDVRD HDINLIHSQF 
HLDMEYEESF AFTLQEAKDL LNNGKQDLLF ETILKKYKEV EAKCDFVLCE GSDFQDTASA
FEFDINAEIA ANLGAPLLLV ANGHRKTAQE VVSATQLALD SYEDKSVDIL ATVINRAAPE
IDQSIARELS CTSCKDKSML VYVIPEEDTL GKPTMSDVKK WINATVLYGE DRMENLISDN
VVAAMQIGNF LDYITQGSLV ITPGDRSDII LSSLASRLSS NFPDISGILL TGGIYPSKNV
LKLIDGWTGV PMPVMLAKDH TYRTTRTVDA LYGKIEPDNP KKIATALGVF EANVNTEELR
LRLVETKSTK VTPRMFEYSL VEKAKANKQR IVLPEGTSDR VLRGADIILR RGVCDVTILG
DPAKLKAKAS ELGLDLDGAQ LINPIDAENL DDYAAAYFEL RKHKGVTEEQ AKDAMSDPTY
YATMMVHKGD ADGMVSGSIT TTQQTILPAF QIIKTKPGAS IVSSVFLMCL RDRVLVYGDC
AVNPNPNAQQ LAEIALSSAE TARIFGVDPK VAMLSYSTGA SGKGDEVEKV REATALAKER
RPDLLLEGPL QYDAAIDPDV AKTKLPDSNV AGKATVFIFP DLNTGNNTYK AVQRSAQAVA
IGPVLQGLNK PVNDLSRGCT ITDIVNTVAI TAIQAQAEKG LI