| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0973 |
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| Symbol | |
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| ID | 8418795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1147873 |
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| End bp | 1148457 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645037542 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_003197839 |
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| Protein GI | 258405097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.15722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000262624 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAGC GGTTATTTAT TGGACTTCCG CTTCCGCAAA CCTATCAACA GGGATTGGAA
GCACTGCGGG ATGAATGGGC GCCCAAGCTA CGGTCGCGTC TGAGCTGGAC ACGGCCCGGC
AATTGGCACC TGACCCTGGC TTTTCTCGGT GACACACGCT CCGCCGAGGC CGAACGGGTG
CGCCAGGCCC TGGAAGCTGT GCACAGTGCG CCCATCACGC TCCAAGCGGC CGGGGGCGGC
GCTTTCCCGC CGGGCAAGAA GCCGCGGGTG CTCTGGGTGG GGTTGCAGCA CGGCAGGCAA
GAAAGTGCGG CGCTGGCCGA CCAGATCTGG TCTGTATTGG CCCCATTGGG GATACAGCCG
CCCGGGCGGC CTTTTCGGGC CCACTTGACT CTGGCGCGGG TCAAGCAGGA ACGCGGGGAC
AGCTGGGAGG CGCTATTTCG GAGCCTTGGC GAGAAGCAAT GGCCCTCGTG CCAGATCGCC
GAGTTTGTGC TTTGGCAAAG CGAATTGACA CCCAAGGGGC CAGTTTACAC CGCGGTCCAG
CGGTATGCCT TGCGCGATCG CCATGCGAGC GGCGCATCGC CATGA
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| Protein sequence | MSQRLFIGLP LPQTYQQGLE ALRDEWAPKL RSRLSWTRPG NWHLTLAFLG DTRSAEAERV
RQALEAVHSA PITLQAAGGG AFPPGKKPRV LWVGLQHGRQ ESAALADQIW SVLAPLGIQP
PGRPFRAHLT LARVKQERGD SWEALFRSLG EKQWPSCQIA EFVLWQSELT PKGPVYTAVQ
RYALRDRHAS GASP
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