| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0965 |
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| Symbol | |
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| ID | 8418787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1138547 |
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| End bp | 1139827 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037534 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_003197831 |
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| Protein GI | 258405089 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000308686 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000659657 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGACC TCAAATTCGT GCGCAAGTCT CCTGAAACCG TCAAGGACGC CTTGCGCAAA
CGGAATATGG ACCTCGATCT GGACGCCTTT CAGGCCATCG ACGCCAAGCG CCGGGAATAC
CTCCAGGAAG TCGAAGACCT CAAAAGCCGC CGCAACGAGG TCTCCAAACA GATCGGCCAG
CGCAAGAAAA ACGGCGAGGA CGCTGAGGAC CTCATCCAGG CCATGGGTGA AGCAGCCGAA
CGCATCAAGG AACTCGATGC TCTGGCCAAG GAGGCTGAGG CCGAGGTCCA GGACTGGATG
CTCTCCCTGC CCAATATTCC TGATACCAGT GTCCCCGATG GCGAAGACGA TGCCGACAAC
GAGGAACTGC GCACCTGGGG CGCGCTGCCC ACCTTTTCGT TCCTTCCCAA AGAACACTGG
GAACTCGGTG TCCAATTGAG CGGTCTCGAT TTCGAACGCG CCGCCAAGCT CACCGGCAGC
CGTTTCGCGG TCTACTGGGG CTGGGCAGCC AAGCTCGAAC GCGCTCTCGC CCAGTTTATG
CTCGACATCC AGACCACCGA GCACGACTAC ACCGAGGTCA TGCCGCCGGT TATCGTCAAC
AGCCAGACCA TGCGCGGTAC TGGACAACTC CCGAAATTCG AGGAAGACCT CTTCAAGCTC
GAAGGATGGG AGTACTACCT CATCCCCACG GCCGAGGTCC CGCTGACCAA TCTTCACGCC
GGCGAAGTGC TCGACGAGCA GGACTTGCCG CGCGGTTACG CCGCCTTCAC CCCCTGTTTC
CGTTCCGAGG CAGGGTCCTA TGGCAAGGAC ACCAAAGGGC TCATCCGCCA GCACCAGTTC
AACAAGGTCG AGCTGGTCCG ATTTGCCCAT CCGGACCATT CCTTTGAGGA GCTCGAAAAC
CTCCTCGGTC ATGCCGAGAC TGTGCTCAAG CGCCTGGAAC TGCCCTACCG CGTCGTCACC
CTCTGTGGGG GCGACATCGG CTTCTCCGCG GTCAAAACCT ACGATCTCGA GGTGTGGCTG
CCCGGGCAGG ACACATACCG GGAGATCTCT TCCTGCTCCA ATTGCGGCGA TTTCCAGGCC
CGTCGCGCCG GCATTCGCTT CAAACGCGCC GGGGCCAAAA AGGCTGAATT CCTGCATACA
TTGAACGGAT CCGGCCTGGC TGTAGGACGC ACATTGGTCG CGGTGCTGGA AAATTATCAG
CAAGAGGACG GTTCGGTGGC GATCCCGGAG GCGCTGAAAC CCTATATGGG CGGGCTCGAG
CGGATCACCC CCAAAAATTG A
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| Protein sequence | MLDLKFVRKS PETVKDALRK RNMDLDLDAF QAIDAKRREY LQEVEDLKSR RNEVSKQIGQ
RKKNGEDAED LIQAMGEAAE RIKELDALAK EAEAEVQDWM LSLPNIPDTS VPDGEDDADN
EELRTWGALP TFSFLPKEHW ELGVQLSGLD FERAAKLTGS RFAVYWGWAA KLERALAQFM
LDIQTTEHDY TEVMPPVIVN SQTMRGTGQL PKFEEDLFKL EGWEYYLIPT AEVPLTNLHA
GEVLDEQDLP RGYAAFTPCF RSEAGSYGKD TKGLIRQHQF NKVELVRFAH PDHSFEELEN
LLGHAETVLK RLELPYRVVT LCGGDIGFSA VKTYDLEVWL PGQDTYREIS SCSNCGDFQA
RRAGIRFKRA GAKKAEFLHT LNGSGLAVGR TLVAVLENYQ QEDGSVAIPE ALKPYMGGLE
RITPKN
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