Gene Dret_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0956 
Symbol 
ID8418776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1130294 
End bp1130836 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content39% 
IMG OID645037523 
Producthypothetical protein 
Protein accessionYP_003197822 
Protein GI258405080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000987724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000322474 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATTTA AATATGTTTT CAGATTAATT GCCTTAATGT CAATTCTTGT TTTTGTTTCA 
GCTTGCCAGC CAAAAATTCC TGATGGAGCC TTGCAACTAA ATAAGCAATC TCTTGAATAT
AGACAGCTAC AGACAAAAAC CTATGATACG GATGATGAAA AAAAAGTGCT ATCTTCCTGT
GCAGGCTTGC TACAAGACCT GGGGTTTAAC ATTGATGAAA GCGAAACGAG CCTCGGAGTG
TTGTGCGGCT CAAAACAAAG AGATGCCACT CAAGCTGGTC AAGTTGTAGC ATCGATATTG
GTAGCAGCGC TGACAGGTGC AGCAACTCCA ATTGATGACA CCCAAAAAAT GCGCGCCTCA
GTTATTACAA AAAAAGTAGG GGAAGAAAAG GAGAGAGTTT CAGTACGTGT TACATTTCAA
CGTATTGTTT GGAATACTCG TGGCCAGATA ACAAAAAAAG AATGTATCTC TGAGCCTGAA
GTATATCAAG AATTTTATAG TAAACTTTCC AAGTCGCTTT TTCTGGAGGG CCATAAGATA
TGA
 
Protein sequence
MKFKYVFRLI ALMSILVFVS ACQPKIPDGA LQLNKQSLEY RQLQTKTYDT DDEKKVLSSC 
AGLLQDLGFN IDESETSLGV LCGSKQRDAT QAGQVVASIL VAALTGAATP IDDTQKMRAS
VITKKVGEEK ERVSVRVTFQ RIVWNTRGQI TKKECISEPE VYQEFYSKLS KSLFLEGHKI