Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0956 |
Symbol | |
ID | 8418776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1130294 |
End bp | 1130836 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 645037523 |
Product | hypothetical protein |
Protein accession | YP_003197822 |
Protein GI | 258405080 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000987724 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000322474 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAATTTA AATATGTTTT CAGATTAATT GCCTTAATGT CAATTCTTGT TTTTGTTTCA GCTTGCCAGC CAAAAATTCC TGATGGAGCC TTGCAACTAA ATAAGCAATC TCTTGAATAT AGACAGCTAC AGACAAAAAC CTATGATACG GATGATGAAA AAAAAGTGCT ATCTTCCTGT GCAGGCTTGC TACAAGACCT GGGGTTTAAC ATTGATGAAA GCGAAACGAG CCTCGGAGTG TTGTGCGGCT CAAAACAAAG AGATGCCACT CAAGCTGGTC AAGTTGTAGC ATCGATATTG GTAGCAGCGC TGACAGGTGC AGCAACTCCA ATTGATGACA CCCAAAAAAT GCGCGCCTCA GTTATTACAA AAAAAGTAGG GGAAGAAAAG GAGAGAGTTT CAGTACGTGT TACATTTCAA CGTATTGTTT GGAATACTCG TGGCCAGATA ACAAAAAAAG AATGTATCTC TGAGCCTGAA GTATATCAAG AATTTTATAG TAAACTTTCC AAGTCGCTTT TTCTGGAGGG CCATAAGATA TGA
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Protein sequence | MKFKYVFRLI ALMSILVFVS ACQPKIPDGA LQLNKQSLEY RQLQTKTYDT DDEKKVLSSC AGLLQDLGFN IDESETSLGV LCGSKQRDAT QAGQVVASIL VAALTGAATP IDDTQKMRAS VITKKVGEEK ERVSVRVTFQ RIVWNTRGQI TKKECISEPE VYQEFYSKLS KSLFLEGHKI
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