| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0934 |
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| Symbol | |
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| ID | 8418754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1107118 |
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| End bp | 1108503 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645037504 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003197803 |
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| Protein GI | 258405061 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0738273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTCGG TCCTGATTAT TGATGACGAA AAAATCGTGA CCAGGATTTT TGCTGAAGCG
GTGCGCCAAA ATGGGCACCA GCCGCTGGAA GCGCACTCGC TAGCTGAAGG CTTGGCTGTG
GCTTATGATC AAAACATTGA TTTAATCTTG TTGGATGTAC GCTTCCCAGA AGGCAATGGC
ATAGAGGCCG TTCAATCCTT ACGGCAGACT CCCGGCGAAC CGGAAATCAT TATTGTCACC
GGGTACGGAG ACCCGGATGC GGCTGAACAG GCCATGCACT ATGGGGCATG GGATTATGTC
CTAAAACCTC CAGACATGGA CCTGCTCGCT CAAAGCCTCT CAAGAGCCTT GGCCTACAGA
AAACAACGCC AGGAAACTCG TGAATCCTTG TCTTTAGAGC GCGACCAGAT AATCGGCACA
AGTCCTTCTT TGAATCGTTC TTTGGACCAA GCAGCTCAGG CTGCGGCATC GGATATCAAC
GTGCTTTTGA CCGGTGAAAC AGGCACAGGA AAGGAATTGT ACGCTGGAGC CATTCACGCC
ACATCAGCCC GCGGCAAATC GAATTTTGTG GTAGTAGATT GCGCCGCTTT ATGTGCAAGC
CTGGCCGAAA GTGAACTCTT TGGCCATGAG AAAGGCGCGT TTACCGGCGC TGAAAAAAAA
CGGAAGGGAT TGGTCTGTTC GGCGGATGGC GGCACTCTTT TTCTCGATGA AATCGGTGAG
TTGTCGCTTG ATTTACAAAA AAAATTATTG CGGGTGCTCC AGGAAAAAAA ATTCCACCCG
GTCGGCTCGG AGCAAGAACT TCGCTGTGAT TTTCGAATCA TTGCCGCCAC GAACAAAAAC
CTCAAAGCTA TGGTTGAAGC GGAAAAGTTT CGAAGTGACC TCCTGTACCG CTTGAGTGCA
TTTACTCTTG ATATCCCGCC GCTCCGGGAG AGAAAACAGG ATATCCCCGA TTTAATCGAT
ACGTATGTCG TCGAGGCCTG CAAGGAGGAA AAGCTGCCGT GTAAACAGGT TGCTTCTGAT
TTCTATGACA TCGCAACAAA TTTTCCGTGG CCCGGGAACG TCCGTGAACT CGTAGGAGCT
GTATATCGAT CAGTGAGCAT CGCTCGCCAG GAGCCCGTGC TTTTCGCGAG GCACCTGCCC
AAAGAAATCC GTGTTCATCA ACTCCGTTCT GAAGTATCAC AATCCTCTCC CTCCCCTTCC
CAGCCCCAAA AATCGATGCC GCCGCTACAA GATGTCCGTA ATCAGGCGCT ATCTCGTGCG
GAAAAGAATT ACTTGCAAGA GCTTGTCGAG TTTACCAACA AAGACATCTC TTCTTCTTGT
GAAATCTCTG GACTTTCTCG GTCTCGCCTC TACGCTTTGC TCAAAAAGCA CGACATACAA
TATTGA
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| Protein sequence | MGSVLIIDDE KIVTRIFAEA VRQNGHQPLE AHSLAEGLAV AYDQNIDLIL LDVRFPEGNG
IEAVQSLRQT PGEPEIIIVT GYGDPDAAEQ AMHYGAWDYV LKPPDMDLLA QSLSRALAYR
KQRQETRESL SLERDQIIGT SPSLNRSLDQ AAQAAASDIN VLLTGETGTG KELYAGAIHA
TSARGKSNFV VVDCAALCAS LAESELFGHE KGAFTGAEKK RKGLVCSADG GTLFLDEIGE
LSLDLQKKLL RVLQEKKFHP VGSEQELRCD FRIIAATNKN LKAMVEAEKF RSDLLYRLSA
FTLDIPPLRE RKQDIPDLID TYVVEACKEE KLPCKQVASD FYDIATNFPW PGNVRELVGA
VYRSVSIARQ EPVLFARHLP KEIRVHQLRS EVSQSSPSPS QPQKSMPPLQ DVRNQALSRA
EKNYLQELVE FTNKDISSSC EISGLSRSRL YALLKKHDIQ Y
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